Staphylococcus capitis subsp. capitis: AYP1020_0583
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Entry
AYP1020_0583 CDS
T03970
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AYP1020_0583 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scap03019
]
AYP1020_0583 (pnp)
03016 Transfer RNA biogenesis [BR:
scap03016
]
AYP1020_0583 (pnp)
Enzymes [BR:
scap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AYP1020_0583 (pnp)
Messenger RNA biogenesis [BR:
scap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AYP1020_0583 (pnp)
Transfer RNA biogenesis [BR:
scap03016
]
Prokaryotic type
tRNA degradation factors
AYP1020_0583 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Csc2
SPATA25
DUF2461
Motif
Other DBs
NCBI-ProteinID:
AKL91730
LinkDB
All DBs
Position
584233..586332
Genome browser
AA seq
699 aa
AA seq
DB search
MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNIVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGNYVINPSVDEKEVSRLDLEVA
GHKDAVNMVEAGASEITESEMLEAIFFGHEEIKRLVAFQQEIIDHIQPEKQEFIPVERDE
ALVEKVKALTEEKGLKETVLTFDKQQRDENLDALKEEVVAHFIDEEDSENEALINEVYAI
LNDLVKEEVRRLIADEKIRPDGRKVDEIRPLDSEVGLLPRAHGSGLFTRGQTQALSVLTL
GALGDYQLIDGLGPEVEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DTADFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDH
MLQIIDHPRKELSAYAPKVVTMHINPDKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQAMIDRAKEIIEDITREAEVGQVYNAKVKRIEKYGAFVELFSGKDALLHISQISK
ERINKVEDVLNIGDSIEVKITEIDKQGRVNASHKALLDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaagaaagttttcaaaactgaatgggctggacgctctttaacgattgag
acagggcaattagctaaacaagctaatggtgctgtgttagtacgttatggagatacagtt
gtgttatcaactgctactgcttcaaaggaacctagagatggtgactttttcccattaaca
gtgaactatgaagaaaaaatgtatgcagcaggtaaaattcctggtggatttaaaaaaaga
gaaggacgaccaggtgatgaagcgacactgacagctcgtttaatcgatagacctattcgt
ccccttttccctaaaggatacagacatgatgttcagattatgaatatcgtcttaagtgct
gatccagattgttcacctgaaatggctgcaatgattggttcttcaatggctttaagcgtc
tcagatattcctttccaaggaccaatcgcaggcgtaaacgtaggttatgttgatggaaat
tatgttattaacccttcagttgatgaaaaggaagtttctagattagatttagaagtagct
ggtcataaagatgccgtaaatatggtagaagctggagctagcgaaattacagaaagtgaa
atgcttgaggcaatcttctttggacatgaagaaatcaaacgtttagttgcattccaacaa
gaaatcatcgatcatattcaacctgagaaacaagaatttattccagttgaacgtgatgaa
gctctcgttgaaaaagtaaaagctttaactgaagaaaaaggattaaaagaaacagtttta
acttttgataaacaacagcgtgatgaaaatctagatgcgctaaaagaagaagtagttgca
cattttattgatgaagaagattcagaaaacgaagcgcttattaatgaagtgtacgcaatt
ttaaacgatttagtgaaagaagaagttagacgtttaattgcagatgaaaaaattcgtcca
gatggtcgaaaagttgatgaaatacgaccacttgattcagaagttggcttgcttccaaga
gctcatggttctggattattcacacgtggtcaaacacaagcgttatcagtgttaacgtta
ggtgctttaggtgattatcaacttattgatggtttagggccagaagtagaaaaacgcttt
atgcatcattataatttccctaacttctcagtaggtgagacaggacctgttcgtgcacca
ggacgtcgtgaaattggtcatggtgctctaggtgaaagagctttacgttatattattcct
gacacagctgatttcccttacacaattcgtatagtaagtgaagtattagaatcaaatggt
tcttcttcacaagcatcaatttgtggatcaacattagctttaatggatgccggcgtacct
attaaagctcctgtagcgggtattgcaatgggtcttgtgactcgtgatgatagctatact
attttaactgatattcaaggtatggaagacgcacttggtgatatggacttcaaagtggct
ggtactaaagaaggtattactgctattcaaatggatattaagatagatggattgacacgt
gaagttattgaagaagcacttgaacaagcacgtcaaggtcgattagctattatggatcat
atgctacaaataattgatcatcctcgaaaagaactaagtgcttatgcaccgaaagttgtt
actatgcatattaatcctgataaaatcagagatgttataggacctggtggtaaaaaaatt
aacgaaattattgatgaaacaggtgtcaaattagatatcgaacaagacggtacaatcttt
ataggtgctgtagatcaagctatgattgatcgtgcgaaagaaattattgaggatattaca
cgtgaagctgaagtaggtcaagtttataatgctaaagttaaacgtattgagaaatatggt
gctttcgtcgaattattctcaggtaaggacgcattacttcacatttcacaaatatctaaa
gaacgaatcaataaagttgaagatgtattaaacattggcgattcaattgaagttaaaatt
acagaaattgataaacaaggtcgtgtcaatgcatctcataaagctttattagatgattag
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