KEGG   Staphylococcus capitis subsp. capitis: AYP1020_0817
Entry
AYP1020_0817      CDS       T03970                                 
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
scap  Staphylococcus capitis subsp. capitis
Pathway
scap00010  Glycolysis / Gluconeogenesis
scap00020  Citrate cycle (TCA cycle)
scap00260  Glycine, serine and threonine metabolism
scap00280  Valine, leucine and isoleucine degradation
scap00310  Lysine degradation
scap00380  Tryptophan metabolism
scap00620  Pyruvate metabolism
scap00630  Glyoxylate and dicarboxylate metabolism
scap00640  Propanoate metabolism
scap00670  One carbon pool by folate
scap00785  Lipoic acid metabolism
scap01100  Metabolic pathways
scap01110  Biosynthesis of secondary metabolites
scap01120  Microbial metabolism in diverse environments
scap01200  Carbon metabolism
scap01210  2-Oxocarboxylic acid metabolism
scap01240  Biosynthesis of cofactors
Module
scap_M00009  Citrate cycle (TCA cycle, Krebs cycle)
scap_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
scap_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:scap00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    AYP1020_0817 (lpd3)
   00020 Citrate cycle (TCA cycle)
    AYP1020_0817 (lpd3)
   00620 Pyruvate metabolism
    AYP1020_0817 (lpd3)
   00630 Glyoxylate and dicarboxylate metabolism
    AYP1020_0817 (lpd3)
   00640 Propanoate metabolism
    AYP1020_0817 (lpd3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    AYP1020_0817 (lpd3)
   00280 Valine, leucine and isoleucine degradation
    AYP1020_0817 (lpd3)
   00310 Lysine degradation
    AYP1020_0817 (lpd3)
   00380 Tryptophan metabolism
    AYP1020_0817 (lpd3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    AYP1020_0817 (lpd3)
   00670 One carbon pool by folate
    AYP1020_0817 (lpd3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scap04147]
    AYP1020_0817 (lpd3)
Enzymes [BR:scap01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     AYP1020_0817 (lpd3)
Exosome [BR:scap04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   AYP1020_0817 (lpd3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like NAD_binding_8 Pyr_redox_3 AlaDh_PNT_C DAO FAD_oxidored FAD_binding_2 GIDA 3HCDH_N Lycopene_cycl FAD_binding_3 TrkA_N Thi4 Trp_halogenase 2-Hacid_dh_C XdhC_C Lys_Orn_oxgnase UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: AKL91963
LinkDB
Position
complement(858830..860251)
AA seq 473 aa
MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVEKSLLGGTCLHKGCIPTKSLLKSAEI
HHTIKNASSFGIDVSNFNVNFENILKRKNDIVNQMHIGVNQLMQHHHIDIYNGTGRILGT
SIFSPQSGTISVEYEDGESDLIPNQFVLIATGSTPKSLPFIEFDHERILSSDDILSIESL
PEHLAIIGGGVIGLEFASLMNDLGTSVTVIEANDRILPTESTQIASSLKKELSHRGVTFY
ENIQLDENSIKKDDDSVTIYFENNAIKVDKVLISVGRTPNTQDIGLNNTKIKTNKAGHII
TNEYQQTEDKHIYAAGDCIGKLQLAHVGSKEGLVAVEHMFDGRPIPVNYDLVPKCVYTYP
EIASIGKNIEEAKAQNIKARAYKVSFKAIGKAMIDDIGEQNGFCEVIINKENDEIIGLNM
IGPHVTELINEVSLLQFMNGSSLELGLTTHAHPSLSEVLMELGLKVEGRAIHV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtcagaaaaacaatatgatttagtcgtccttggtggaggaactgctggttatgtagct
gctatcagagcttcgcaattaggtaagaaagtagcaatagttgaaaaatctttattaggt
ggcacatgtttacataaagggtgtatacctactaaatctttattaaaatctgctgaaata
catcatactattaaaaatgctagtagttttggtattgatgtaagtaattttaatgttaat
tttgaaaatattttaaaacgtaaaaatgatattgtgaatcaaatgcatataggtgtaaac
cagttaatgcaacaccatcacatagatatatataatggcactggcagaatattaggaaca
tctatattttcacctcaaagtggtacgatttcagtggaatacgaagatggtgagtctgat
ttaataccaaatcaatttgtattaattgctactggctctacaccgaaatcattaccattt
attgaatttgatcatgaacgtattttatcaagtgacgatatcctttcaattgagtcttta
ccagaacatttggcgattataggtggtggtgtcatcggattagaatttgcttcactaatg
aatgacctaggaacttcagttactgttatcgaagcaaatgaccgtattttaccaactgaa
agcactcaaatcgcttcatcattaaaaaaagaattatctcatagaggtgtaactttctac
gagaatatccaattagatgaaaatagtattaaaaaagatgatgatagtgttacaatttat
tttgaaaataatgcaattaaagtagataaagttttaatatctgttggtagaacacctaat
actcaagatattggtcttaataataccaaaatcaaaacaaataaagcaggacatattatc
actaatgaatatcaacaaactgaagacaagcatatttatgctgcaggagattgcataggt
aaacttcagcttgctcatgtaggttcaaaagaaggtttagttgcagttgaacacatgttt
gatgggcgtcctatacctgttaattatgacctggtaccaaaatgtgtttacacatatcca
gaaatcgcttcaattggtaaaaatattgaagaagccaaagctcaaaacattaaagcgcgt
gcttataaagtatcatttaaagcaatcgggaaagcgatgattgatgatattggtgagcaa
aatggtttttgcgaagtgattattaataaagaaaatgatgaaatcattggtcttaacatg
attggacctcatgtgactgaactgattaatgaagtttcattattgcaatttatgaatggc
tcatctttagaacttggattaactacccatgctcatccatctttatctgaagttttgatg
gaattaggattaaaagttgaaggtagagcgattcacgtatag

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