Staphylococcus capitis subsp. capitis: AYP1020_0817
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Entry
AYP1020_0817 CDS
T03970
Symbol
lpd3
Name
(GenBank) Dihydrolipoyl dehydrogenase 3
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap00010
Glycolysis / Gluconeogenesis
scap00020
Citrate cycle (TCA cycle)
scap00260
Glycine, serine and threonine metabolism
scap00280
Valine, leucine and isoleucine degradation
scap00310
Lysine degradation
scap00380
Tryptophan metabolism
scap00620
Pyruvate metabolism
scap00630
Glyoxylate and dicarboxylate metabolism
scap00640
Propanoate metabolism
scap00670
One carbon pool by folate
scap00785
Lipoic acid metabolism
scap01100
Metabolic pathways
scap01110
Biosynthesis of secondary metabolites
scap01120
Microbial metabolism in diverse environments
scap01200
Carbon metabolism
scap01210
2-Oxocarboxylic acid metabolism
scap01240
Biosynthesis of cofactors
Module
scap_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scap_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scap_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
scap_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AYP1020_0817 (lpd3)
00020 Citrate cycle (TCA cycle)
AYP1020_0817 (lpd3)
00620 Pyruvate metabolism
AYP1020_0817 (lpd3)
00630 Glyoxylate and dicarboxylate metabolism
AYP1020_0817 (lpd3)
00640 Propanoate metabolism
AYP1020_0817 (lpd3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AYP1020_0817 (lpd3)
00280 Valine, leucine and isoleucine degradation
AYP1020_0817 (lpd3)
00310 Lysine degradation
AYP1020_0817 (lpd3)
00380 Tryptophan metabolism
AYP1020_0817 (lpd3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AYP1020_0817 (lpd3)
00670 One carbon pool by folate
AYP1020_0817 (lpd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scap04147
]
AYP1020_0817 (lpd3)
Enzymes [BR:
scap01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
AYP1020_0817 (lpd3)
Exosome [BR:
scap04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
AYP1020_0817 (lpd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
HI0933_like
NAD_binding_8
Pyr_redox_3
AlaDh_PNT_C
DAO
FAD_oxidored
FAD_binding_2
GIDA
3HCDH_N
Lycopene_cycl
FAD_binding_3
TrkA_N
Thi4
Trp_halogenase
2-Hacid_dh_C
XdhC_C
Lys_Orn_oxgnase
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AKL91963
LinkDB
All DBs
Position
complement(858830..860251)
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AA seq
473 aa
AA seq
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MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVEKSLLGGTCLHKGCIPTKSLLKSAEI
HHTIKNASSFGIDVSNFNVNFENILKRKNDIVNQMHIGVNQLMQHHHIDIYNGTGRILGT
SIFSPQSGTISVEYEDGESDLIPNQFVLIATGSTPKSLPFIEFDHERILSSDDILSIESL
PEHLAIIGGGVIGLEFASLMNDLGTSVTVIEANDRILPTESTQIASSLKKELSHRGVTFY
ENIQLDENSIKKDDDSVTIYFENNAIKVDKVLISVGRTPNTQDIGLNNTKIKTNKAGHII
TNEYQQTEDKHIYAAGDCIGKLQLAHVGSKEGLVAVEHMFDGRPIPVNYDLVPKCVYTYP
EIASIGKNIEEAKAQNIKARAYKVSFKAIGKAMIDDIGEQNGFCEVIINKENDEIIGLNM
IGPHVTELINEVSLLQFMNGSSLELGLTTHAHPSLSEVLMELGLKVEGRAIHV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaacaatatgatttagtcgtccttggtggaggaactgctggttatgtagct
gctatcagagcttcgcaattaggtaagaaagtagcaatagttgaaaaatctttattaggt
ggcacatgtttacataaagggtgtatacctactaaatctttattaaaatctgctgaaata
catcatactattaaaaatgctagtagttttggtattgatgtaagtaattttaatgttaat
tttgaaaatattttaaaacgtaaaaatgatattgtgaatcaaatgcatataggtgtaaac
cagttaatgcaacaccatcacatagatatatataatggcactggcagaatattaggaaca
tctatattttcacctcaaagtggtacgatttcagtggaatacgaagatggtgagtctgat
ttaataccaaatcaatttgtattaattgctactggctctacaccgaaatcattaccattt
attgaatttgatcatgaacgtattttatcaagtgacgatatcctttcaattgagtcttta
ccagaacatttggcgattataggtggtggtgtcatcggattagaatttgcttcactaatg
aatgacctaggaacttcagttactgttatcgaagcaaatgaccgtattttaccaactgaa
agcactcaaatcgcttcatcattaaaaaaagaattatctcatagaggtgtaactttctac
gagaatatccaattagatgaaaatagtattaaaaaagatgatgatagtgttacaatttat
tttgaaaataatgcaattaaagtagataaagttttaatatctgttggtagaacacctaat
actcaagatattggtcttaataataccaaaatcaaaacaaataaagcaggacatattatc
actaatgaatatcaacaaactgaagacaagcatatttatgctgcaggagattgcataggt
aaacttcagcttgctcatgtaggttcaaaagaaggtttagttgcagttgaacacatgttt
gatgggcgtcctatacctgttaattatgacctggtaccaaaatgtgtttacacatatcca
gaaatcgcttcaattggtaaaaatattgaagaagccaaagctcaaaacattaaagcgcgt
gcttataaagtatcatttaaagcaatcgggaaagcgatgattgatgatattggtgagcaa
aatggtttttgcgaagtgattattaataaagaaaatgatgaaatcattggtcttaacatg
attggacctcatgtgactgaactgattaatgaagtttcattattgcaatttatgaatggc
tcatctttagaacttggattaactacccatgctcatccatctttatctgaagttttgatg
gaattaggattaaaagttgaaggtagagcgattcacgtatag
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