Staphylococcus capitis subsp. capitis: AYP1020_0856
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Entry
AYP1020_0856 CDS
T03970
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scap
Staphylococcus capitis subsp. capitis
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scap03019
]
AYP1020_0856 (cshB)
03009 Ribosome biogenesis [BR:
scap03009
]
AYP1020_0856 (cshB)
Enzymes [BR:
scap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AYP1020_0856 (cshB)
Messenger RNA biogenesis [BR:
scap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AYP1020_0856 (cshB)
Ribosome biogenesis [BR:
scap03009
]
Prokaryotic type
rRNA helicases
AYP1020_0856 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AKL92002
LinkDB
All DBs
Position
complement(892124..893467)
Genome browser
AA seq
447 aa
AA seq
DB search
MAKHPFEHFNLDESLIKAVQDLNFEKPTEIQNRIIPRILKGTNLIGQSQTGTGKTHSFLL
PLIQMIDVDLQEPQAIVVAPTRELAQQLFQVASHLCKFKQEVNVKLFIGGTDIEKDKQRC
NRQPQLIIGTPTRINDLAQGGHLHAHLASNLIVDEADLMIDLGLIEDVDYIAARLNDEAH
IAVFSATIPKSLQPFLNKYLSQPEFVEVDHKSQNKKNIEFYLIPTKGTAKVDKTLNLIDI
LNPYLCIIFCNSRENANELADSLNKEGIKVGMIHGGLTPRERKQQMKRIRNLDFQYVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHNISLIED
KGYHFENVDIKNGELKPIKAHDTRRTRQRKDDHLTNEVKHKVRSKSKRKVKPGYKKKFKQ
EVEKMKRQERKIYSKRQNKQKRKNNKG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatccatttgagcattttaatttagacgaaagtttaattaaagcggttcaa
gatcttaattttgaaaaacctacagaaatacaaaatagaattatcccaagaatattaaaa
ggcactaacttaataggtcaatcacaaactggtacaggaaagacgcattctttcttatta
cctttaatacaaatgattgatgttgatcttcaagaaccccaagctattgtagttgcacca
acacgagagctcgctcaacaattattccaagtagcgagtcacctgtgcaaatttaaacaa
gaagtgaacgttaaactgtttataggtggtacagatattgaaaaagacaaacaacgctgt
aatagacaacctcaattaattattggtacacctacacgtattaatgaccttgctcaaggc
ggacatcttcatgcacaccttgccagcaatttaattgttgatgaggctgacttaatgatt
gatttaggattaattgaggatgtagattatatagcagctagattaaatgatgaagcgcac
attgctgtatttagtgcaacgattcctaaatcattgcaaccatttttaaataaatattta
agccaacctgaattcgttgaggttgatcataagtctcaaaataaaaagaacattgaattt
tatttaatacctacaaaagggactgctaaagtagataaaacgctaaatctaatagatatt
ttgaatccatatctttgtattattttctgtaatagtagagaaaatgcaaacgaacttgca
gattctctaaataaagaaggtattaaagtaggtatgattcacggtggtttgacacctaga
gaacgtaaacaacaaatgaaacgtattagaaacttagacttccaatacgttattgcaagt
gatctcgcttcgagaggtatcgatattgaaggggtaagtcacgtcataaatttcgacgtt
cctaatgatattgatttctttacacatcgtgtaggtcgtacaggaaggggtaattataaa
ggagtagcaattactctttatagccctgatgaagagcacaatatttcattaatcgaagat
aaaggctatcattttgaaaatgtggacattaaaaatggagaacttaaaccgattaaagca
cacgacacaagacgcactagacaacgaaaagatgatcacttaacaaatgaagttaagcat
aaagttcgaagtaaatcgaaaagaaaagttaaaccaggatataagaaaaagtttaagcaa
gaagtagaaaaaatgaaacgccaagaaagaaagatttatagtaagagacaaaataaacaa
aaacgtaaaaacaataaaggatag
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