Staphylococcus capitis subsp. capitis: AYP1020_0859
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Entry
AYP1020_0859 CDS
T03970
Symbol
rpoD_1
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AYP1020_0859 (rpoD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scap03021
]
AYP1020_0859 (rpoD_1)
Transcription machinery [BR:
scap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AYP1020_0859 (rpoD_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
AKL92005
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Position
complement(895438..896544)
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AA seq
368 aa
AA seq
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MSDNQVKIKKQTIDPTLTLEDVKKQLIDKGKKEGHLSHEEIAEKLQNFEMDSDQMDDFFD
QLNDNDITLVNEKDSSDTDEKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKKIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaccaagtgaaaattaaaaagcaaacaattgatccgactttaacattagaa
gatgttaaaaaacaattaattgacaagggtaaaaaagaaggtcatttaagtcatgaagaa
attgctgagaagcttcagaatttcgaaatggattctgaccagatggatgatttcttcgat
caactaaatgataatgatataacgcttgttaatgaaaaagatagttcagatacagatgag
aaattaaatccaaatgatttaagtgcccctcctggtgtcaaaattaacgacccagttcgt
atgtatcttaaagagattggtagagttaacttattaagcgctcaagaagaaatagagtta
gctaaaaaaattgaacaaggcgatgaagtagcaaaatctcgtctagctgaagccaactta
cgtcttgttgttagtattgctaaaagatatgtaggaagaggtatgttattccttgattta
attcaagagggtaacatgggcttgattaaagctgtagaaaaatttgactttagtaaaggg
tttaaattttcaacatatgcgacttggtggattagacaagcaatcactagagccattgct
gaccaagcacgtactatccgtattcctgtgcatatggttgaaacaattaataaattaata
cgtgttcaacgccaacttttacaagacttaggccgagatcctgcaccagaagaaattggt
gaagaaatggatttaccacctgaaaaagtacgtgaaatcttgaaaattgctcaagagcct
gtatctcttgaaacgccaattggtgaagaagatgacagtcatttaggtgatttcattgaa
gaccaagaagctcaaagcccatcagaccatgcagcttacgaattgttaaaagaacaactt
gaagatgttcttgacacattaactgatagagaagaaaatgtattacgtttaagatttggt
ttagatgatggacgtacaagaacacttgaagaagtaggtaaagtatttggcgtaacacgt
gaacgtatacgtcaaatcgaagctaaagctttaagaaaactaagacatcctagtcgtagt
aagagacttaaagatttcatggattaa
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