Staphylococcus capitis subsp. capitis: AYP1020_0972
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Entry
AYP1020_0972 CDS
T03970
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap03030
DNA replication
scap03410
Base excision repair
scap03420
Nucleotide excision repair
scap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYP1020_0972 (polA)
03410 Base excision repair
AYP1020_0972 (polA)
03420 Nucleotide excision repair
AYP1020_0972 (polA)
03440 Homologous recombination
AYP1020_0972 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scap03032
]
AYP1020_0972 (polA)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_0972 (polA)
Enzymes [BR:
scap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYP1020_0972 (polA)
DNA replication proteins [BR:
scap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AYP1020_0972 (polA)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AYP1020_0972 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYP1020_0972 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AKL92118
LinkDB
All DBs
Position
complement(1010118..1012748)
Genome browser
AA seq
876 aa
AA seq
DB search
MDKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAIYGFAMLLEKIIKEEQPNHFLVAFDAG
KTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKHYELENYEADDIIGTLSREA
DKAGFETIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYTPSFIAEKYDGLQPKQIIDMK
GLMGDTSDNIPGVAGVGEKTAIKLLKQFTSVEGVYEHIDDVTAKKLKEKLVNSKDDALMS
KDLATINVESPIEVTLNDTKLENQDDNTNKIELFKKLEFKQLLADIDEEANNDVVNEKTF
EIESDFQHINFDSLEHAIIHFELEGTNYLKDNILKFGFYADDSHVVINAEDIKQYQDLVQ
WLEDKNTTKTVYDAKKTYVAAHRLNIDIQNVQFDVMLSSYIIDPSRSIDDVKSVVSLYGQ
NYVKDNVSVYGKGKKHQVPDEEVLNKHVASITEAIANSKPEMEAQLEEYNQVELLKDLEL
PLAKILSEMEEIGIYTDVEDLKQMENEIQEKLDVLIKNIHEAAGEEFNINSPKQLGVVLF
ETLKLPVIKKTKTGYSTAVDVLEQLQGEHPIIEHILEYRQLSKLQSTYVEGLQKVISKDQ
RIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPTDKDSVILSADYSQIELR
VLAHITQDESLKEAFINGNDIHTATAMKVFNVEANEVDSLMRRQAKAVNFGIVYGISDYG
LSQSLGITRKKAKAFIDDYLASFPGVKQYMSDIVKDAKADGYVETLLHRRRYIPDITSRN
FNLRSFAERTAMNTPIQGSAADIIKLAMVKFYEKVKDTNYHATLLLQVHDELIFELPKSE
VEDFSKFVEEIMEQALDLDVPLKVDSSYGPTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttggataaattagtgttaatagatggtaacagtttaagctttagagcgttttatgcttta
ccattactttctaataaagctggtattcatacaaatgctatatatggctttgcgatgttg
cttgagaaaattattaaagaagaacaacccaatcactttttagttgcatttgatgctggt
aaaactactttcagacattctaagtacagtgaatataaaggtggacgtcaaaaaacacca
ccagaattaagtgaacaatttccttatattcgtcaattattagatgcttatcacattaaa
cactatgaattagaaaattatgaagcggatgacattattggcacgctaagcagagaggct
gataaggctggtttcgaaacgattattattacaggggatcgagatttaacacaattagcc
actgataatgtcacaatttattacactaaaaaaggtgtgacagatgtagatcactacacg
ccaagttttatagctgaaaaatatgatgggctacaaccgaaacaaattattgatatgaaa
ggtctcatgggagatacttcagataatattccaggggttgctggcgttggtgaaaagact
gcaatcaaacttcttaaacaatttacttctgtagaaggtgtttatgaacatattgatgat
gtcacagctaaaaaattaaaagaaaaactcgtgaatagtaaagatgatgccttgatgagt
aaagacttagctacaattaatgttgaaagtcccattgaggttactctaaatgatacaaaa
ttagaaaatcaagatgataatactaacaaaatagaattgtttaaaaagcttgaatttaaa
caattattggcagatattgatgaagaagctaataacgatgtagttaacgaaaagaccttt
gaaattgaatcggattttcaacatatcaactttgatagtttagagcatgcaattattcat
tttgaattagagggcacaaattatcttaaagataatatcctaaaattcggtttttatgct
gatgattcacatgtggtcattaatgctgaagatattaagcaatatcaagatttagtccaa
tggttagaagataaaaatacgactaaaactgtatacgatgccaaaaaaacttatgtggct
gcgcatcgtttaaatatcgatattcaaaatgtgcagtttgatgtaatgttgtctagttat
attattgatccttctcgttcaatagatgatgtaaaatcagtagtttcactttatggacag
aattatgttaaagataatgtgtcagtttacggtaaggggaaaaaacatcaagttcctgat
gaagaagtattaaataaacatgtagcttcaatcacagaggcaattgctaactctaaacct
gaaatggaggctcaattagaagagtataatcaagttgagttactcaaagatttagaatta
ccacttgctaaaattttaagtgaaatggaagaaattggtatttatactgatgttgaagac
ttaaaacaaatggagaacgaaatccaagaaaaattagatgttttaattaaaaacattcat
gaagctgcaggagaagaatttaatattaattctcctaaacaattaggagtagttttattt
gaaacgctaaaactacctgttatcaagaaaactaagacaggctattcaacagcagtagac
gtattagaacaattgcagggagagcatccaattattgaacatatattggagtatagacaa
ttgtcaaaattacaatcaacttatgttgaaggattacaaaaagtgattagtaaagatcag
agaattcacacacgttttaatcaaacgttagcacaaacaggtagactttcaagtgtagat
ccaaacttacagaatatacctattcgtttagaagaaggaagaaaaattagaaaagccttt
aaacctacagataaggatagcgtaatcttatcggctgactattcacaaatagagttacgt
gtgcttgcacatattactcaagatgaaagtttgaaagaggcatttattaatggtaacgat
attcatactgcgacagctatgaaagtatttaacgtagaagctaatgaagtagatagttta
atgcgtagacaagccaaagcagtaaactttggtattgtgtatggaattagcgattatggc
ttaagtcaaagtttaggaattacacgtaaaaaagcgaaagcttttatagatgattactta
gctagttttcctggtgtaaaacaatacatgtctgacattgttaaagatgcaaaagcagat
ggatatgttgaaacacttctacatcgacgtcgttatattccagatattacaagtcgtaat
ttcaacttaagaagttttgcagaaagaacagcaatgaataccccgatacaaggtagcgca
gcagatattattaaattagctatggttaagttttatgaaaaagttaaagatactaattat
cacgcgacattattattgcaagttcatgatgaattgattttcgagttgcctaaatctgaa
gtcgaagattttagtaagtttgttgaagaaattatggaacaagctttagatttagatgta
cctctaaaagtagattcaagttatggaccaacatggtatgacgctaaataa
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