KEGG   Staphylococcus capitis subsp. capitis: AYP1020_1049
Entry
AYP1020_1049      CDS       T03970                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
scap  Staphylococcus capitis subsp. capitis
Pathway
scap00740  Riboflavin metabolism
scap01100  Metabolic pathways
scap01110  Biosynthesis of secondary metabolites
scap01240  Biosynthesis of cofactors
scap02024  Quorum sensing
Module
scap_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:scap00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    AYP1020_1049 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AYP1020_1049 (ribD)
Enzymes [BR:scap01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     AYP1020_1049 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     AYP1020_1049 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD SNAD4
Other DBs
NCBI-ProteinID: AKL92195
LinkDB
Position
complement(1112370..1113419)
AA seq 349 aa
MSRFMNYAIQLAQMVDGQTGINPPVGSVVVKDGRIVGLGAHLKKGDKHAEVQALDMAGED
AKDATIYVSLEPCTHHGSTPPCVNKIIEFGIRKVIYAVKDTTLASKGDEILKEAGIEVEF
QFNENAAELYKDFFTAKRNSIPELTVKVSSSLDGKQATDSDESKWITNKEVKEDVYKLRH
EHDAVLTGRKTIDADDPLYTTRVQDGKHPIRVILSKSGQIDFEQQLFADTASPIWIYTEN
ENLKNQSNDKHIEIICLEKCDSTAILKDLYQRGIGKLLVEAGPNVTSQFLQSHHLDELIL
YLAPKLIGGSGKHQFYKTDQVIDLPEATQFEIVYSKLINQNIKLKLRKK
NT seq 1050 nt   +upstreamnt  +downstreamnt
ttgagtcgatttatgaattatgccattcaacttgctcaaatggttgatggtcaaactggt
ataaatccgccggttggttctgtagtggttaaagatggtagaattgtcggtttaggcgcc
catttgaaaaagggtgataaacacgcagaagtacaagcattagatatggcgggagaagat
gctaaagatgcaactatatacgtttctttagaaccttgtactcatcatggttctacacca
ccttgcgtaaataaaattattgaatttggtattcgtaaggttatctatgcggtaaaagac
actaccttagcttctaagggtgatgaaatacttaaagaagctggtattgaagttgaattt
caatttaatgagaatgccgctgaactttataaagacttctttactgctaaaagaaatagc
atcccagagttaactgttaaagtttcatctagtttagatggcaaacaagctactgattct
gatgagagtaaatggataactaataaagaagttaaagaagatgtttataagttgcgtcac
gagcatgatgctgtattaacaggtagaaaaacgatagacgctgatgatccattgtatacg
actagagttcaggatggtaagcatccaattagagttattctatcaaagtcaggacaaatt
gattttgagcaacagctatttgcagatactgcttcacctatttggatttatactgaaaat
gaaaatttaaaaaatcaaagtaatgataaacatatagaaattatttgtttagaaaaatgc
gatagtacagctatattaaaagatttatatcaaagaggtattggaaaactgctagtcgag
gcaggtccaaatgttacttcacaatttctccaatctcatcatttagatgaactcattctt
tatttagccccgaaattaataggtggttcaggtaaacatcaattttacaaaactgatcaa
gttattgatttacctgaagcaactcaatttgaaattgtttattccaagttaattaatcaa
aatataaaattgaaactacgaaagaagtga

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