Staphylococcus capitis subsp. capitis: AYP1020_1399
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Entry
AYP1020_1399 CDS
T03970
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AYP1020_1399 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scap03021
]
AYP1020_1399 (rpoA)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_1399 (rpoA)
Enzymes [BR:
scap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AYP1020_1399 (rpoA)
Transcription machinery [BR:
scap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AYP1020_1399 (rpoA)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AYP1020_1399 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AKL92490
LinkDB
All DBs
Position
complement(1426291..1427235)
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AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKVRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaacctagaattgagacaattgaaattagtgaagatgctaaattc
ggtaagttcgttgttgaaccacttgagcgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaagtacatcgaaattgaagga
gttttacacgaattttcagcagtagacaatgttgtagaagatgtttcaacaattattatg
aacattaaaaaattagcattaaaaatttactctgaagaagacaaaactcttgaaattgat
gttaaagatgaaggcgaagtaactgcaagtgacattactcacgacagcgatgttgagatt
ttaaatccagaacttaaaatcgcaacagtgtctaaaggtggacatcttaaagtgcgtctt
gttgctaataagggtagaggttacgcattagctgaacagaataatactagtgatttacca
attggtgtaattcctgttgattcactatattcacctgtagaacgtgttaactacactgta
gaaaatacacgcgtaggtcaaagtagtgattttgataaattaactttagatgtttggact
aacggttcaatcactccacaagagtcagtatcattagcagctaaaataatgactgaacac
ttgaatatctttgtaggtctaactgatgaagctcaaaatgctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagtacttgaaatgtctatcgaagaattagacttatcagta
cgttcatataactgcttaaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctctagaagaagttaaa
tataaattagaagatttaggattaggattaagaaaagaagattga
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