Staphylococcus capitis subsp. capitis: AYP1020_2206
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Entry
AYP1020_2206 CDS
T03970
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap03030
DNA replication
scap03430
Mismatch repair
scap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYP1020_2206 (dnaX_1)
03430 Mismatch repair
AYP1020_2206 (dnaX_1)
03440 Homologous recombination
AYP1020_2206 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scap03032
]
AYP1020_2206 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
scap03400
]
AYP1020_2206 (dnaX_1)
Enzymes [BR:
scap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYP1020_2206 (dnaX_1)
DNA replication proteins [BR:
scap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AYP1020_2206 (dnaX_1)
DNA repair and recombination proteins [BR:
scap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AYP1020_2206 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
TIP49
AAA_19
AAA_22
AAA_14
AAA_16
Mg_chelatase
AAA_7
SKA1
RCF1-5-like_lid
AAA_24
nSTAND3
AAA_assoc_2
PIF1
ResIII
AAA_18
Cep57_MT_bd
FMN_dh
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AKL93293
LinkDB
All DBs
Position
2265834..2267540
Genome browser
AA seq
568 aa
AA seq
DB search
MDYQALYRMYRPQSFDDVVGQTHVTKTLRNAISKGKQSHAYIFSGPRGTGKTSIAKVFAK
AINCLNSDDGEPCNECAICKGITQGTNSDVIEIDAASNNGVDEIRNIRDKVKYAPSESKY
KVYIIDEVHMLTTGAFNALLKTLEEPPSHAIFILATTEPHKIPPTIISRAQRFDFKAISM
DQIVDRLKFVAESQSLEYDTAALEFIAKTSEGGMRDALSIMDQAIAFGDERLTLQDALNV
TGSVDEAALNDLFKDVVEGNVKEAFGRYHHFISEGKEVNRLINDMIYFVRDTIMIKTSNE
SIEYDALVSFELDTLYRMIDIINDTLVSIRFSVNQNVHFEVLLVKLAEMIKAQPQTVQNM
ATTAVATEPDNDVLLQRMEQLENELKTLKAQGVSNSGQTQQPKKPTRTVQRSKNAFSMQQ
IAKVLDKANKEDIKLLKDHWQEVIDHAKSNDKKSLVSLLQNSEPVAASEDHVLVKFEEEI
HCEIVNKDDEKRNNIESVVCNIVNKTVKVVGVPSDQWLRVRSEYIQNRNANGENNSESGE
AQQPAQVDVAQKAKDLFGEETVHMIDED
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtggattaccaagctttgtatcgaatgtatagaccgcaaagtttcgatgatgttgttgga
caaacacacgtcacgaaaacgttacgtaatgccatctctaaaggtaaacaatcacatgct
tacattttcagtggacccagaggaactgggaagacaagtatcgcaaaagtgtttgccaag
gcgattaattgccttaatagcgatgatggagaaccttgtaatgagtgtgcgatttgtaaa
ggtattactcaaggtacaaattctgatgtgattgaaattgacgcggcgagtaataacggt
gtggatgagattagaaatataagagataaggtgaaatacgcaccaagtgaatccaaatat
aaagtatatattatagatgaggtacatatgttaacgacgggggcgtttaacgccttgctt
aaaactttggaagagcctcctagtcacgcgatatttattctagcgactacagaaccacat
aaaattcctcctactattatctctcgagcacaacgttttgattttaaagcgattagtatg
gatcaaattgtagaccgcctaaagttcgtagctgaatcacagtcactagagtatgatact
gcagcattagaatttattgctaaaacttcagaaggtggtatgcgtgatgctttaagtatc
atggatcaagcgattgcttttggggacgagcgtttgacactacaagatgcgttgaacgtg
actggtagcgttgatgaagcggcattaaatgatttgttcaaagatgttgttgaggggaat
gttaaagaagcttttggtagatatcatcactttatttcagaaggaaaagaagtgaatcga
cttattaacgacatgatttacttcgttagagatacgataatgataaaaacatcaaatgaa
tcaattgaatatgatgctttagttagttttgaattagacacactatatcgtatgattgat
atcattaatgatacacttgtttcaattcgatttagcgttaaccaaaacgttcattttgaa
gtgttactagttaaacttgcggaaatgattaaagcgcaaccacagactgttcagaatatg
gctacaacagctgtagctactgaacctgataatgatgtactgcttcaacgtatggagcaa
cttgaaaatgaattaaaaacactgaaagcgcaaggagtttcaaatagtggtcaaacacaa
caaccgaagaaacctacacgtacagttcaacgctctaaaaatgcattttcaatgcaacaa
atagctaaagtattagataaagctaataaagaagacataaaattattaaaagaccactgg
caagaagtgattgatcatgctaaaagtaatgacaaaaaatcattagtaagtttactccaa
aactcagaaccagtggcagcgagtgaagatcatgtgttagttaagtttgaggaagagatt
cattgcgaaattgtaaataaagatgatgaaaagcgtaacaatatagagagtgtagtttgt
aatatagtaaataaaacggtaaaagtcgttggtgtaccttcggatcaatggttaagagtt
agatctgaatatattcaaaatcgtaacgctaatggtgaaaataacagcgagtcaggagag
gcgcaacagccagcacaagttgatgtggcacaaaaggctaaagatttgtttggtgaagaa
acagtacatatgatagacgaagactga
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