Staphylococcus capitis subsp. capitis: AYP1020_2267
Help
Entry
AYP1020_2267 CDS
T03970
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
scap
Staphylococcus capitis subsp. capitis
Pathway
scap00750
Vitamin B6 metabolism
scap01100
Metabolic pathways
scap01240
Biosynthesis of cofactors
Module
scap_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
scap00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
AYP1020_2267 (pdxS)
Enzymes [BR:
scap01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
AYP1020_2267 (pdxS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
IGPS
NMO
NanE
OMPdecase
TMP-TENI
TetR_C_27
FMN_dh
DUF561
IMPDH
TIM
Peptidase_S66C
TF_AP-2
Motif
Other DBs
NCBI-ProteinID:
AKL93335
LinkDB
All DBs
Position
2325088..2325975
Genome browser
AA seq
295 aa
AA seq
DB search
MSKIVGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVA
RMANPKIVEEVMNAVSIPVMAKARIGHITEARVLESMGVDYIDESEVLTPADEEYHLRKD
QFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRRVNAEVSRLTVMND
DEIMTFAKDLGAPFEVLKQIKDNGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLEERMQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcgtaggctcagaaagagtaaaaagaggaatggctgaaatgcaaaaaggt
ggcgttattatggacgtcgtaaatgcagaacaagctaaaattgctgaagaagctggtgct
gttgcagtaatggctttagaacgcgttccatcagacatccgagcagcaggtggcgtggca
cgtatggctaatcctaaaattgtagaggaagtaatgaatgctgtgtctatacctgttatg
gctaaagcccgtataggacatattactgaagctagagtattagaatcaatgggtgttgat
tatatcgatgaatctgaagtattaactccagctgatgaagagtatcacttaagaaaagat
caatttacagtgcctttcgtttgtggttgccgtaatttaggtgaagctgcacgacgtatt
ggagaaggtgctgcaatgttacgtacgaaaggtgaacctggaacaggcaatatcgtagaa
gctgtacgtcacatgagacgcgttaatgctgaagttagtcgtctaacagtaatgaatgat
gatgaaattatgactttcgctaaagatttgggagcaccttttgaagtattaaaacaaatt
aaagataatggacgtttaccagtagtaaactttgcagcaggtggcgtagcaacacctcaa
gatgctgctttaatgatggaattaggtgctgatggtgtatttgttggttctggtattttt
aaatcagaagatcctgaaaaatttgctaaagcaattgttcaagcaacgactcattatcaa
gattatgaattaattggaaaattggctagtgaacttggtacagcgatgaaaggtttagat
atcaaccaaatttctttagaagaacgtatgcaagagcgtggatggtaa
DBGET
integrated database retrieval system
