Staphylococcus casei: QMO72_04670
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Entry
QMO72_04670 CDS
T09326
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scaq
Staphylococcus casei
Pathway
scaq03420
Nucleotide excision repair
scaq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QMO72_04670 (pcrA)
03430 Mismatch repair
QMO72_04670 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaq03400
]
QMO72_04670 (pcrA)
Enzymes [BR:
scaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMO72_04670 (pcrA)
DNA repair and recombination proteins [BR:
scaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMO72_04670 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
QMO72_04670 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
WJE87271
LinkDB
All DBs
Position
998023..1000221
Genome browser
AA seq
732 aa
AA seq
DB search
MNALVNKMNDEQSQAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF
TNKAAKEMKERVEALVGEQAQVLWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV
IKDVLKTENIDSKKFEPRMFIGAISNLKNELKTPEDAQKEANDYHTQMVATVYKGYQRQL
TRNEALDFDDLIMVTIRLFERVPEVLDYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK
NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKNNS
ERKPKGLWTGNTDGDKIHYYEATTERDEAEYVVREIMKQQRNGKKFKDMAILYRTNAQSR
VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGIGPS
SVDKIQAYAVQNDLSMFDALAEVDFIGLSKKVTQECINFYDVMQNIIKQQEFLEISEIVE
EALTKSGYREMLEREQSLESRSRLENIDEFMSVPKDYEKNTPLEEQSLINFLTDLSLVAD
IDEAQIDDGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSDDEHEMQEERRICYVA
ITRAEETLYITHATSRMLFGRPQSNMASRFLREIPEELMENDNKSKAASNGFKSATKQPV
KRGYSQRATTSKKTQVSTDWKIGDKVVHKSWGEGMVSNVNEKNGSVELDIIFKSEGPKRL
LAQFAPIEKKGE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcattagttaataagatgaatgacgagcaaagccaagcagtacgaactacagaa
gggcctttacttataatggcaggtgcagggtcgggcaaaacacgtgtgttaacacaccgc
attgcttatttgttagatgaaaaagatgtgtctccatataatgttttggcgataaccttt
acaaataaagcagctaaagaaatgaaagaacgtgttgaagcattggttggtgaacaagct
caagtcctttggatgtctacattccactctatgtgtgtgagaattcttcgtagagatgca
gatagaattggaattgaacgtaattttacaattattgatccaaccgatcaaaaatctgtt
attaaagatgtattgaagactgagaacatagatagcaaaaaatttgagcctagaatgttt
attggggctattagtaatttaaaaaatgaattgaaaacacctgaagatgcacaaaaagaa
gctaatgattatcatacacaaatggttgctacagtgtataaaggctaccaacgacaactt
acaagaaatgaagcactagacttcgatgatttaattatggtaactattcgcttgtttgaa
cgtgtaccagaagtattggattactatcaaaataaattccaatacatacacgtagatgaa
taccaagataccaataaagcccaatacacattagttaaattattagctagtaaattcaaa
aatttatgtgtggttggtgactccgaccaatctatctatggttggcgtggtgccgatatt
caaaacattctatcatttgaagaagattacccagaggcaaaaacaatatttttagaacaa
aactatcgttcgacaaaaaatattttaaatgcagccaacgaagtgatcaaaaacaattca
gagcgtaaacctaaaggattgtggactggtaatacagatggagataaaattcattattat
gaagcgacgacagagagagacgaggccgaatatgttgttcgtgaaattatgaaacaacaa
cgcaatggcaagaaatttaaagatatggcaattttatatcgtacaaatgcgcaatcacgt
gtacttgaagaaacatttatgaaatcgaatatcccatatactatggttggcggtcaaaag
ttctatgacagaaaagagattaaagatctattaagctacttacgtatcattgcaaacagt
aatgatgatattagtttacaacgtattattaatgttcctaaacgaggtatcggaccatca
tcagtagataaaattcaagcttatgccgttcaaaatgacttgagtatgtttgatgcatta
gcagaagtagattttataggattatcaaaaaaagtcacgcaagaatgtattaacttttat
gatgttatgcaaaatattataaaacaacaagagtttttagaaattagtgaaattgtagaa
gaagctttaacaaaatcaggttaccgtgaaatgttggaacgtgaacaaagtttagagtcg
agaagtagattagaaaatatagatgagttcatgtctgttccaaaagattatgaaaagaat
acaccattagaagaacagtcattaattaatttcttaacagatttatcactagttgcagat
attgatgaagcacaaatcgatgatggtgtaacactaatgacgatgcactctgccaaaggt
ttagagtttcctatcgtatttattatgggaatggaagaatcactatttccacatataaga
gcaattaaaagtgacgatgaacatgagatgcaagaagaaagacgtatctgctatgtagct
attacacgtgctgaagaaactttatatatcacacatgctacttcacgaatgttatttgga
cgtccacaatcgaatatggcttcaagatttttgagagaaataccagaagagttaatggaa
aatgataataaatctaaagcagcgagcaatggatttaaatcagcgacgaaacaaccagtc
aaaagaggttatagtcaacgcgcgactacttcgaagaaaactcaagtatctacagattgg
aaaattggtgataaagtggttcataagtcttggggtgagggtatggtaagtaatgtcaat
gagaaaaatggttcagtagaattagacattatctttaaatccgaaggtcctaaacgttta
cttgcacaatttgcaccgattgaaaagaagggggaatag
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