Staphylococcus casei: QMO72_06050
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Entry
QMO72_06050 CDS
T09326
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scaq
Staphylococcus casei
Pathway
scaq03030
DNA replication
scaq03430
Mismatch repair
scaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QMO72_06050
03430 Mismatch repair
QMO72_06050
03440 Homologous recombination
QMO72_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scaq03032
]
QMO72_06050
03400 DNA repair and recombination proteins [BR:
scaq03400
]
QMO72_06050
Enzymes [BR:
scaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QMO72_06050
DNA replication proteins [BR:
scaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QMO72_06050
DNA repair and recombination proteins [BR:
scaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QMO72_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WJE87502
LinkDB
All DBs
Position
1239645..1242848
Genome browser
AA seq
1067 aa
AA seq
DB search
MVAHLNIHTTYDLLNSSLRIKDVVTKAAKEGYTALAITDTNVLYGYPQFYDACIAANMHP
IFGMTIYVTDGLSEVETIVLAQNNQGLKDLFKLSSAIKMKEKTETPVEWLKKYSQHFVVI
FKNVDQSHQSIISEFNEEAHVYVNHTSQVSYDLPIVWAQHTCYLNREDAETLTALAAIKD
NSKLDLVSEQQDYDAHLYGQQDLSELSLSKDIWHNTNKLATLCNAEIRYHQSLLPKFKTT
DNQPSKDYLWSLLESNLQRLNLAEHKVAQYKRRLIHEYQIITDMGFEDYFLIVSDLIHYA
KTHDILVGPGRGSSAGSLVSYLLNITTMDPIEYNLLFERFLNPERVTMPDIDIDFEDTHR
DKVIQYVQEKYGSHHVAGIVTFGHLLARAVARDVGRIMGFDDITLNEISKLIPHKLGITL
DEAYAQEDFKQFVHRNHRHERWFEICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTLGD
TGLLTQWTMTEAERVGLLKIDFLGLRNLSIIHQIVNQVHSDMNVTIDIEQIPFNDEKVFQ
LLSRGDTTGIFQLESDGIRNVLQKLQPEHFEDIVAVTSLYRPGPMEEIPTYISRRHDPTK
VKYLHEDLQPILQKTYGVIIYQEQIMQIASKFAGFNYGEADILRRAMSKKNRAVLESERH
HFVEGALKNGYSESLSKQIFDLILKFADYGFARAHAVSYSKIAYIMSYLKVYYPNYFYSN
ILSNTIGSEKKTSQIIDEAKHQHLNILSPHINYSHWFYKATKKGIYLSIGAIKGVGYQSV
KLIVDERKENGYFKDFFDFARRIPKRIKSRKLLEALILVGAFDTFGKNRATLLQAIDQVL
DDVSNVEQDGFIFDVLTPKTTYEEKDELPDKVLSDYEKEYLGFYVSTHPVEKTFEQKQYL
GIYKLTNARDHQPILVQIDSSKKIRTKNGQNMAFVTLNDGLNNLDGVVFPDAYKKYEPLL
NGDDVFIVRGKFDNRNNKKQLIINQIEAIEAYESYIFNHAKQIVIRNLNDEPELEQYITQ
NTDNDYIPVEYFQEDQNNFKTIGYVARNNASIRAFIQRFSPWDIRII
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatttaaatattcacacaacatatgacctattaaattctagtttaagaatt
aaagatgtggtgactaaagctgcaaaagagggctatacagccttagccatcacagataca
aacgttttatatggctatccacaattttatgacgcatgtatagcagcaaatatgcatcct
atttttggtatgacaatctatgtcacagatgggttatctgaggttgaaacaattgtctta
gctcaaaataatcaagggttaaaagatttattcaagttatcttcagctatcaaaatgaaa
gaaaaaacagaaacccctgttgagtggttgaaaaaatattcacaacattttgttgtcata
tttaaaaatgtagatcaatcacatcaatctattatttctgagtttaacgaggaagcacat
gtatatgtgaatcatacgagtcaagtatcatacgatttacccatcgtatgggcacaacat
acatgctatctaaatcgagaggatgctgagacgttaacggcattagcagcaattaaagac
aattcgaaattagatttagtaagtgaacaacaagactatgatgcacatttgtacggtcaa
caagatttaagtgagctcagcctaagcaaagatatatggcataatacaaacaaacttgcg
acgctttgtaatgctgaaatacgttaccaccaatctttgctgccaaaattcaaaacgacc
gacaatcagccatctaaagattatttgtggagtttattagaaagtaacttacagcgatta
aacttagctgaacacaaagtagcgcaatataagcgtagactaatacatgaatatcaaatt
atcactgatatgggatttgaagattatttcttaatagtaagtgatttaatacattatgct
aaaacacatgatatcttagtggggccaggccgtggttcttctgccggttctctcgtgagt
tacttattaaatattactactatggatccaatagaatataaccttttatttgaacgattt
ttaaatccagaacgtgtcacaatgccggatatagatattgactttgaagacacacatcgt
gacaaagtgattcaatatgtacaagaaaaatatggttcccatcatgtagcgggtattgtg
acgtttggtcatctattagcaagagctgtagcaagagatgtgggtagaattatgggcttt
gatgatattacgctcaatgaaatttctaaattgattccacacaagttaggtattacttta
gatgaagcatatgctcaggaggattttaaacaatttgtacatcgaaatcataggcatgaa
cgatggtttgagatatgtaaaaagttagagggattacctcgccatacatctacgcatgca
gctggaattattattaatgatcatcctttatatgaatacgcaccgcttactttaggagat
acagggcttttaacgcaatggactatgacagaagctgagcgagtaggtctgttaaaaatc
gacttcttaggactgcggaatttatcgattatacatcaaattgtcaatcaagttcatagt
gatatgaacgttaccatagacattgaacagataccgtttaatgatgaaaaagtgtttcaa
ctattatccagaggcgacaccacaggtatatttcaactcgaatcagatggtattagaaat
gtgttacaaaaattacaacctgaacattttgaagatatcgtagctgtgacttcactttat
agacctggtccaatggaagaaataccaacttatatttctagaagacacgatcctacaaaa
gttaaatatttacatgaagatttacaacccatattacaaaagacatatggagttattatt
tatcaagaacaaataatgcaaattgcgagtaagtttgctggttttaattatggtgaagcg
gacattttaagacgtgcaatgagtaagaaaaatcgagctgtgctagaaagtgaacgacac
catttcgttgaaggtgcattgaaaaatggttatagcgaaagtttgagcaaacaaatattt
gatttaatattaaaatttgcagattatggctttgcacgtgcgcatgcagtgagttattct
aaaatcgcatatatcatgagttatttgaaggtatattaccccaactatttttattcaaat
attctgagtaacacaattggtagtgagaaaaaaacatcacaaattattgatgaagcaaaa
catcaacatttaaatattctttctccacatatcaattatagccattggttctacaaagct
actaaaaaaggtatctatttatcgataggtgcaattaaaggcgtaggttatcagagtgtt
aagttgattgttgatgagcggaaagaaaatgggtatttcaaagacttttttgattttgcc
agacgtataccgaaaagaataaaatcaagaaagctacttgaagcattaatacttgtaggt
gcatttgatacatttgggaaaaatcgagctacgttattacaggcgattgaccaagtgtta
gatgatgtgtctaatgttgagcaagacggatttatatttgatgtattaacgcctaaaaca
acatatgaagaaaaagatgaattaccggacaaagtattaagtgattatgaaaaagaatat
ttaggtttttatgtatctacgcacccagttgaaaagacatttgagcaaaaacaatatctt
ggtatttataaattaaccaatgcgcgagatcatcaacccatattagttcaaattgatagt
agtaaaaagatacgcaccaaaaatggccaaaacatggcatttgtaacattaaatgatgga
ttaaataatttagatggtgttgttttccctgatgcatataaaaaatatgagccattacta
aatggagacgacgtttttattgtcagaggtaagttcgataatcgaaataataagaaacag
ctcatcatcaatcaaatagaagctatagaagcatatgaatcatacatttttaatcatgca
aaacaaattgttatcagaaatttaaatgacgaacctgaattagaacaatacattactcaa
aatacagataatgactatataccagtagaatactttcaagaagatcagaataactttaaa
acaataggctatgtggcccgtaataatgcatcaattagggcattcatacaaaggttttct
ccttgggatattagaattatttaa
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