Staphylococcus casei: QMO72_09720
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Entry
QMO72_09720 CDS
T09326
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
scaq
Staphylococcus casei
Brite
KEGG Orthology (KO) [BR:
scaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaq03400
]
QMO72_09720 (addA)
Enzymes [BR:
scaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QMO72_09720 (addA)
DNA repair and recombination proteins [BR:
scaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QMO72_09720 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
ResIII
AAA_12
KxDL
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WJE85689
LinkDB
All DBs
Position
complement(2016501..2020157)
Genome browser
AA seq
1218 aa
AA seq
DB search
MSQIPVKPADVRWTDNQWKSIYAKGQDVLVAAAAGSGKTAVLVERIIQRILNDKIDVDRL
LVVTFTNASAREMKQRVDQRIQEASQEAPDNEHLKNQRIKIHQAQISTLHSFCLKLIQQH
YDVLDIDPNFRTSGEAENILLLEQTIDEVLEQHYDILDPSFVDLTEQLSSDRNDDQLRNT
IKQMYYFSIANPDPYGWLRNLASPYYDEAQQNELLQLLNELAMIFMESALEALDKSYNLF
MLLEEVDKQVAVLEKESAFLNQAMEDGQLNSEVIAQHQFEARFPAKNKKIKEANEMMIDA
YDDGKKHYDHYKALVSKVQEDYFSRDAQDLKQDMQKLAPRVSYLSKVTADVIEQFDQKKR
SRNLLDFSDYEHFALRILMNEDGSPSEVADVYRQQFEEILVDEYQDTNRVQEKILSCFKR
GTEADGNLFMVGDVKQSIYKFRQADPSLFIDKYNRFTLDGSDNGMRIDLSQNFRSREEVL
TTTNYLFKHMMDESVGEIIYDDAAQLYYGAAFDDKPHDVQMNMLVEDPSSDLNGSEQEAE
YIVRQVEKIMDEHEIYDMKTNQYRKPSYKDIVILERSYGQARKIQQAFKDHNIPFHVKSK
EGYFEQTEVQLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELSNIRVLSPNDDYFYQS
IQNYIAHEAANKNLVEKLQAFLQDIAMYQTYSQSHPVYQLIDKFYNDHYVIQYFSGIIGG
KGRRANLYGLFNKAVEFENSSFRGLYQFIRFIDELMERGKDFGEENIIGPNDDVVRMMTV
HSSKGLEFPFVIYSGLSRKFRRDDLYKSVILNQTYGLGMNYYDVESNISYPSLSSVTYKA
ITEKEMISEEMRLIYVALTRAKEQLFLIGRVKDEKELQQLEQAPVSDTHLPVSYRITAQR
PIDMIYPILAKYQSTSLPNELRFENSIHDLEASMIPYVHLTTDFYQDIASETVFEESEQR
TIQDIHALNTGNDAIKKQIQTQLTHEYAFQVAIDKPSKQSVSELKRQLETEQTDTNYDRV
RQYRIGSTAYDRPGFLSHSSKRKANEIGTLMHTVMQHLPFRSGGLNQSEIEQYIGRLIEQ
HIIPEDAKTDIRYDDITYFVQSELYETIAQSDAIYRELPFVVNQSKVESMREVEEDASII
QGMIDLIFVKEGQYYFVDYKTDAFNRRRNMTDEEIGEQLRSRYKVQMDYYRNTLETLLNA
DVKGYLYFFKFGQLSIDS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaattccagtgaaacccgctgatgttagatggacggataatcagtggaaaagc
atttatgcaaaggggcaagatgtacttgtagcagcggctgcaggttctgggaaaaccgct
gtattagttgaacgtattatacagcgcattttaaatgataaaattgatgtagatcgatta
cttgtcgtgacatttacgaatgcaagtgcacgtgaaatgaaacagcgtgtggatcaacga
atacaagaagcttcacaagaggcgcctgacaatgaacatttaaaaaaccaacgaattaaa
atacatcaagctcaaatttctacactacatagtttctgtttgaaattaatacaacaacac
tatgatgtattagatatagatccaaattttagaacaagtggtgaagcggaaaatatactg
ttattagagcaaacgattgatgaagttttagagcaacattatgatatccttgaccctagt
tttgttgacttaaccgaacaattatcatccgatcgaaacgatgaccaactgcgtaataca
attaaacaaatgtattattttagtatagcaaatccagatccttatggatggcttcgcaat
ttggcaagtccttattatgatgaagcacagcaaaatgaattactccaattattgaatgaa
ttggctatgatttttatggagtcagcgttagaagcactagataaaagttataatttattt
atgctgttggaagaagtagataagcaagtagcagtgttagaaaaggaaagcgcattttta
aatcaagctatggaagatggacagttaaattccgaagtgattgcacaacatcaatttgaa
gctcgttttccagcaaagaataaaaagataaaggaagcaaatgaaatgatgattgatgct
tatgatgatggtaaaaagcattatgatcattataaagcattagtatcgaaagtgcaggaa
gattatttctcccgcgatgcgcaagatttgaaacaagacatgcagaaattagccccaagg
gtttcttatttatctaaagtcactgcggatgttattgaacagtttgatcaaaagaaacgg
agcagaaatctcttggatttttctgattatgaacactttgctttacgcatattgatgaat
gaagatggctcaccttcagaagttgcggatgtatatcgacaacaattcgaggaaatcttg
gtcgatgaataccaagatacaaaccgagtccaagaaaagatattgtcatgttttaagcgt
ggaactgaagctgatggtaatttatttatggtaggtgatgttaagcaatctatctataaa
tttagacaagctgatccaagtttatttatcgataaatataatcgatttacattagatggt
tctgacaatggcatgcgtattgatttatctcaaaacttccgctctcgagaagaagtatta
acgacgacaaactatttatttaaacatatgatggatgaatccgtaggagaaattatatat
gatgatgcagcacaactatactatggtgccgcattcgatgataaaccacatgatgtacaa
atgaatatgttggtggaagatccttcatcagatttaaatggatccgaacaagaagcagaa
tatatagtgcgacaagtagagaagattatggatgagcacgaaatatatgatatgaaaacc
aatcaataccgtaagccgagctataaagatattgtcatattagaaagatcgtatggccag
gctagaaagattcaacaagcttttaaagatcataatattccattccatgttaagagtaag
gaagggtattttgaacaaactgaagtccaattagtcttatcatttttaagaacaatagat
aatcctttacaagatatctatttagtaggattgatgcgttcagtcatttatcaatttacg
gaggatgaattatcaaatattcgtgtcctcagtccgaacgatgattatttctaccaatct
atccaaaactacatagctcatgaagcagccaataaaaatttagtggaaaaattacaagca
tttttacaagatatagcaatgtatcaaacatatagtcaaagtcatcccgtttatcaattg
attgataaattttataatgaccattatgttatccaatatttcagtggtattataggtggc
aaagggcgtcgtgctaatttatatggcttgtttaataaagctgtggaatttgaaaattca
agtttccgtggcttatatcaatttatacgttttatagatgaattaatggaacgaggaaaa
gattttggcgaagaaaatattatcggtcccaatgatgatgttgtgagaatgatgacagtg
catagtagtaaagggcttgaatttccttttgtaatttattcaggattatctcgtaaattt
agaagagatgatttgtataaatctgtaattctcaatcaaacctatggtcttggcatgaat
tactatgatgtagaaagtaatatttcttatccgtcattgtcttcagtaacttataaagct
attacagaaaaagaaatgatttcagaagaaatgcgtttaatttatgtagcattaacgcgc
gcaaaagagcaattgtttttaattggtcgtgtcaaagacgagaaagagctacagcaatta
gagcaagcaccagtgtcagatacacatttacccgttagttaccgtataactgcacaaagg
cctattgatatgatttatccaatattggccaaatatcaatctacatcgttacctaacgaa
ttacgctttgaaaattcaattcacgatttagaagcatctatgataccttatgtccatcta
accacagacttttatcaagatattgcttcagaaacagtatttgaagaaagtgagcagcgg
acaatccaagatattcatgcattaaatactggtaatgatgccataaaaaaacaaatacaa
acgcagttaacacatgaatatgcatttcaggtggcaattgataagccatcaaaacagtct
gtatctgaacttaagagacaattagagaccgaacaaactgataccaactatgatcgtgtc
cgtcaatatcgtattggttcaacagcctacgatagaccggggtttttaagtcacagttca
aaacgtaaagcgaatgaaataggcacattgatgcatactgtcatgcagcatttaccgttc
cgaagtggtggtctgaaccaatcagaaatagaacaatatattggacgactcattgagcaa
catatcattcctgaagatgcgaaaacggatatacgttatgacgatataacgtattttgtt
caaagtgaattatatgaaaccatcgcacaaagtgacgcaatataccgagagttaccattt
gttgtcaatcagtctaaagtagaatcgatgagagaagtagaagaagatgcttcaataatt
caaggtatgattgatttgatttttgtaaaagaagggcaatattatttcgttgattataaa
acagacgcttttaacagaaggagaaatatgacagatgaagaaataggtgaacagttaagg
tcacggtataaagtacaaatggattattaccgtaatacattagaaacactattaaatgct
gacgttaaaggttatttatatttctttaaatttggtcaactatctattgattcatag
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