Staphylococcus casei: QMO72_10510
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Entry
QMO72_10510 CDS
T09326
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
scaq
Staphylococcus casei
Pathway
scaq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QMO72_10510 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scaq03400
]
QMO72_10510 (uvrA)
DNA repair and recombination proteins [BR:
scaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QMO72_10510 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QMO72_10510 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_23
AAA_33
nSTAND1
nSTAND3
DnaJ_CXXCXGXG
AAA_22
AAA_14
ATPase_2
Viral_helicase1
ATPase
cobW
NACHT
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WJE85837
LinkDB
All DBs
Position
complement(2152935..2155772)
Genome browser
AA seq
945 aa
AA seq
DB search
MKQPSIVVKGARAHNLKDVDIEIPKDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKP
FCPNHGIEIESQTVQQMVDRVMQLEERSKIQLLAPVVSHRKGSQEKLIDDISKKGYVRVR
VDGEITDVNEVPELDKNKNHTIEVVIDRLVVKAGIEARLADSIETGLNLSEGSLIVDIID
GDELKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLKVDLDLIVPDKDKT
LNEGAIVAWEPTSSDFYPTLLNRVCEVYKINMDKPFKTLTDRQKDIILNGSNGKEIEFVF
KQRNGTTRKRTMEFEGVINNINRRYHESPSELVREMMSKYMTELPCETCHGKRLSPEALS
VYVAGKNIGEIVENSIKTALYHYQHIELSNQDQKIADQILKEIISRLEFLYNVGLEYLTL
NRASGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIDTLKEMRDLGNT
LIVVEHDDDTMRAADYLVDVGPGAGEHGGEIVASGTPKQVMNSKKSLTGQYLSGKKRIEV
PEVRREITDRKISVKGARSNNLKAIDVDFPLSTMTVVTGVSGSGKSTLVNEVLYKSLAKE
INKSKVKPGDYDEIQGIDQLERIIDIDQSPIGRTPRSNPATYTGVFDNIRDIFAQTNEAK
VRGYSKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCGGSRYNRETLEVTYKG
KNISDILAMTAEEATFFFEKVPKIHRKLQTLVDVGLGYVTLGQPATTLSGGEAQRVKLAS
ELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNKLVENGETVVIIEHNLDVIKMADYIV
DLGPEGGDGGGTVVATGTPEDIAEVKESYTGQYLKTVLERDTVKR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccatccattgtagtaaaaggggcacgtgcccacaatttaaaagatgtagat
atagaaataccaaaagataaactcattgttatgacaggtctatcggggtcgggtaaatcc
tcacttgccttcgatacgatatatgcagaggggcaacgcagatacgtagaatctttgagt
gcttatgcacgacagtttttaggacaaatggataaacctgatgtggatactatagaaggt
ttatctccagcaatatctattgatcaaaagacgacgagtaagaatccaagatcaaccgta
gcgacagttactgaaatatatgactatattcgtttgctttatgctcgtgttggaaagcca
ttctgtcccaatcatggtatagaaatagaatcccaaaccgttcagcaaatggtagatcgc
gtcatgcagcttgaagaacgttctaagattcaactattagcgccggtggtttcacataga
aaaggatcacaagaaaaacttatagatgatattagcaaaaaaggttatgtacgcgtacgt
gtcgatggtgagattacagatgtaaatgaagtgcctgaattagataagaataaaaatcat
acaattgaagttgttattgatagacttgtagtcaaagcaggtatagaagcgcgtcttgct
gattctatagagactggtttgaatctttcagaaggcagtttaattgtagatatcattgat
ggcgatgaattaaagttctctgagaatcatgcatgtccaatatgtggattttcaattgga
gaattagagccacgtatgttcagttttaacagtccatttggagcatgtccaacttgtgat
ggtttaggacaaaaattaaaagtagacttagatttaattgtacctgataaagacaaaaca
ttaaacgaaggtgctattgtagcatgggaaccaacgagttctgatttttatccaacactg
ttaaatcgtgtatgtgaagtatacaaaattaacatggataaaccatttaaaacattaaca
gatagacaaaaagacattatccttaatggttcaaacggcaaagaaattgaatttgtcttt
aaacagcgaaacggtacaacacgtaaacgtactatggagtttgaaggcgttatcaacaac
attaatcgacgttaccatgaatctccctcagaactcgtgagagaaatgatgagcaagtac
atgacggaattaccttgtgagacatgtcacggtaaacgtttgagtcctgaggcattatct
gtttatgtcgctggaaaaaatataggtgaaattgttgaaaattcaatcaaaacagcgtta
tatcactatcaacatattgaattgtcaaaccaagatcaaaaaattgccgatcaaatatta
aaagaaatcatttcacgtcttgaatttttatataatgttggattagaatacttaacgctc
aatcgtgcgtcaggttctttatctggtggagaagcgcaacgtattcgtttggctactcaa
attggatcaagactttcaggtgtactctatgtcttagatgaaccatctattgggttacat
caacgtgataatgaccgacttatcgatactttgaaagaaatgcgtgatcttggaaataca
cttatagttgttgaacatgatgatgatactatgcgtgcggcagattacttagtagatgtc
gggccaggcgcaggagagcatggcggagaaattgttgctagtggcacgccaaagcaggta
atgaatagtaaaaaatccttaacaggtcaatatttaagtggtaaaaaacgtatagaagtg
cctgaagtacgtcgtgaaattacggatagaaagataagtgttaaaggcgcacgcagtaat
aatctaaaagcaatagacgttgatttcccgttatccacaatgactgttgtcacaggtgtt
tcaggatctggtaagagtacgctggtaaatgaagtgttatataaatcattggcaaaagag
attaataaatctaaagttaaacccggagactatgatgagatacaaggtattgatcaattg
gagcgtattatagatattgatcagtcaccaatcggacgtacgccaagatcgaacccagcg
acgtatacaggtgtctttgataacatcagagatatttttgctcaaactaatgaagctaag
gtgagaggctattcgaaaggccgtttcagttttaatgttaaaggcggccgatgtgaagcg
tgtaaaggtgacggcattattaaaattgaaatgcatttcttacctgatgtatatgtacct
tgtgaagtttgtggtggttcaagatataatcgtgagacacttgaagtcacttataaagga
aagaacatttctgatatattagcaatgactgctgaagaagcaaccttcttctttgaaaaa
gtaccgaagattcatcgtaaattacaaacacttgtggatgttggattaggctatgtaact
ttaggtcaacctgcaacaactttatctggtggtgaggcgcaacgtgtgaaacttgcttct
gaattacacaaacgttctactgggcgttccatttatattttagatgagccaacgacgggg
ctccatgttgatgatattagccgcttgctaaaagtacttaataaacttgtggaaaatgga
gaaactgtggtcatcatcgagcataacttagatgttatcaagatggcagattatattgtt
gatctaggaccagaaggtggagacggtggcggtaccgttgtagctacaggcacgccagaa
gatattgctgaagtaaaagaaagttacaccggtcaatatttaaaaactgtcttagaaaga
gatacggtaaaacgataa
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