Staphylococcus caprae: DWB96_05560
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Entry
DWB96_05560 CDS
T06252
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
scar
Staphylococcus caprae
Pathway
scar00740
Riboflavin metabolism
scar00790
Folate biosynthesis
scar01100
Metabolic pathways
scar01110
Biosynthesis of secondary metabolites
scar01240
Biosynthesis of cofactors
Module
scar_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
DWB96_05560 (ribB)
00790 Folate biosynthesis
DWB96_05560 (ribB)
Enzymes [BR:
scar01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
DWB96_05560 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
DWB96_05560 (ribB)
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
YpoC
Motif
Other DBs
NCBI-ProteinID:
QDW93691
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Position
1131731..1132912
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AA seq
393 aa
AA seq
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MQFDNIELAIEALKNGESIIVVDDEDRENEGDLVAITEWMADDTINFMAKEGRGLICAPI
DRSIARRLELNAMERNNTDVYGTHFTVSVDHKTTTTGISANERMLTARALIDDNASATDF
NRPGHLFPLIAKDNGVLERNGHTEAAVDLAKLSGARPAGVICEIMNDDGTMAKGNDLQTF
KERHNLKMITIESLIAYRKQTESHVELNAKVNMPTDLGTFDMYGFTTDLSDEEIVVIAKG
DIRRNENVRIHSACLTGDIFHSQRCDCGAQLEASMKYIDENGGMIIYLPQEGRGIGLMNK
LRAYELIEKGYDTVTANLALGFDEDLRDYNIAAQILKYFNIEKIKLLSNNPKKFEGLKEY
GINIEDRIELIVPETEHNHSYMETKKRKMGHLI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgacaatattgagttggctatagaagctttaaaaaatggtgaaagcattatt
gtagttgacgatgaggatagagaaaatgaaggagatttagtcgctattactgaatggatg
gctgatgatacgattaactttatggcaaaagaaggacgaggtcttatatgtgcaccaatt
gatcgttcaattgcgcgtcgtctagaattaaatgcgatggaaagaaataatactgacgta
tatggcactcattttactgtaagtgtagatcataaaacaacgactactggcattagcgcg
aatgagcgcatgttaactgcaagagcattgatagatgacaatgcaagtgcgacagatttc
aatcgtcctggacatttatttccattgattgctaaagacaatggtgtattagaacgtaat
ggtcatactgaagcggctgtcgatttagccaaattatcgggggcacgacctgctggcgtc
atttgtgaaataatgaatgatgatggcacaatggctaaaggcaatgatttacaaacgttt
aaggaacgccataatttgaaaatgattacgattgaaagtttgattgcgtatcgtaaacaa
acggagtctcatgttgaattgaatgctaaagttaacatgcctacggatttaggtacattt
gatatgtatggcttcactactgatttgagtgatgaagaaattgtagtcattgctaaagga
gatatccgcagaaatgaaaatgttcgtattcactctgcatgtttaacgggcgatattttc
catagtcaaagatgtgattgtggcgctcaacttgaagcatcaatgaaatatattgatgag
aacggcggtatgattatttatcttccacaagaaggtcgtggtattgggttgatgaacaaa
ttacgtgcttatgaactcattgaaaaaggatacgatacagttactgcgaatcttgcttta
ggttttgatgaagatttaagagattataatatagcggctcaaatattgaaatactttaat
attgaaaagattaaattactcagtaataatcctaagaaatttgaaggattaaaagagtat
ggtattaacattgaagatagaattgaattaattgttcctgaaactgaacataatcatagc
tatatggaaacgaagaagagaaaaatgggacacttgatttaa
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