Staphylococcus caprae: DWB96_05935
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Entry
DWB96_05935 CDS
T06252
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scar
Staphylococcus caprae
Pathway
scar03030
DNA replication
scar03410
Base excision repair
scar03420
Nucleotide excision repair
scar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DWB96_05935
03410 Base excision repair
DWB96_05935
03420 Nucleotide excision repair
DWB96_05935
03440 Homologous recombination
DWB96_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scar03032
]
DWB96_05935
03400 DNA repair and recombination proteins [BR:
scar03400
]
DWB96_05935
Enzymes [BR:
scar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DWB96_05935
DNA replication proteins [BR:
scar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DWB96_05935
DNA repair and recombination proteins [BR:
scar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DWB96_05935
NER (nucleotide excision repair)
GGR (global genome repair) factors
DWB96_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QDW93766
LinkDB
All DBs
Position
1231711..1234341
Genome browser
AA seq
876 aa
AA seq
DB search
MDKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKIIKEEQPNHFLVAFDAG
KTTFRHSKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIKRYELENYEADDIIGTLSKEA
DQSGYETIIITGDRDLTQLATDNVTIYYTKKGVTDVDHYTPSFIAEKYNGLEPKQIIDMK
GLMGDTSDNIPGVPGVGEKTAIKLLNQFNSVEGVYDNIDEVTAKKLKEKLINSKDDALMS
KDLATINVESPIEVSLKDTKLENQDDNHEKIELFKKLEFKQLLSDIDEDANNEEVTDKTF
DVETDFQHIDFKNLSHATIHFELEDTNYLKDNILKFGLYTDDTHIVINAEDIKQHSDLIE
WLEDAQTVKTVYDAKKTYVAAHRLDINIQNVQFDVMLASYIIDPSRAIDDVKSVVSLYGQ
NYVKDNVSIYGKGKKHHIPEDNILNEHVASITEAIASAKPLMEEQLKEYNQVELLADLEL
PLAKILSEMEEIGIYTDVNDLKHMENEIQEKLDVLIKNIHEAAGEEFNINSPKQLGVVLF
ETLKLPVIKKTKTGYSTAVDVLEQLKGEHPIIEHILEYRQLSKLQSTYVEGLQKVISKDN
RIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRKIRKAFKPTSEDSVILSADYSQIELR
VLAHITQDESLKEAFIHGHDIHTATAMKVFNVEANDVDSLMRRQAKAVNFGIVYGISDYG
LSQSLGITRKKAKAFIDDYLASFPGVKQYMSDIVKDAKAQGYVETLLHRRRYIPDITSRN
FNLRSFAERTAMNTPIQGSAADIIKLAMVKFNEKVKNTNYHAKLLLQVHDELIFELPKSE
VEDFSEFVEEIMENALDLDVPLKVDSSYGPTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttggataaattagtgttaatagatggtaacagtttaagttttagagcgttttatgctttg
ccattactttctaataaagctggtattcatacaaatgctgtgtatggctttgcaatgtta
cttgaaaaaataattaaagaagaacaacctaatcactttttagttgcatttgatgctggt
aaaacgactttcagacactcaaagtacagtgagtataaaggtggtagacaaaaaacacca
cctgaactaagtgaacaatttccttatatccgtcaattattagatgcgtatcatattaaa
agatatgaacttgagaattatgaagcggatgatattatcggtactttaagtaaagaagca
gatcaatcgggttacgaaacaattattattactggggatcgtgacttaacacaattggct
actgataatgtcactatttattacaccaagaaaggtgttacggatgtcgatcactatacg
ccaagttttattgctgaaaaatataacggcttagaacctaagcaaattatcgatatgaaa
ggtctcatgggagatacttctgataatatacctggtgttccaggcgtaggtgagaaaacg
gcaattaaattacttaatcaatttaattctgttgaaggcgtttatgacaatatcgacgaa
gtcactgctaaaaaattaaaagaaaaacttatcaatagtaaagatgatgcattgatgagt
aaagacctagctacaatcaatgttgagagtccaattgaagtttctcttaaagatacaaaa
ttggaaaaccaagatgataatcatgaaaaaatagagttatttaaaaagctagaatttaag
caattgttatcagatattgatgaagatgcgaataacgaggaagttacagataaaacgttt
gacgttgaaacagattttcaacacattgattttaaaaatttatctcatgccacaattcat
tttgagttagaagacaccaattatctaaaagataatatattaaaatttggattatacaca
gatgatacgcacatcgtaatcaatgcagaagatattaaacaacattcagacttaatcgaa
tggttagaagatgcacaaactgttaagactgtatatgatgctaagaaaacgtatgtagct
gcacatcgtttagatattaacatccaaaacgttcaatttgatgttatgctcgcaagctat
attattgatccatcgcgtgcaattgatgatgtgaaatcagtcgtctctttatatggacag
aattacgttaaagataatgtttctatttatggaaaaggaaaaaaacatcatattccagaa
gacaatattttaaatgaacacgttgcgtcaattacagaagccattgcgagtgctaaacca
ttaatggaagaacaattaaaagagtataatcaagttgaacttcttgcagatctagaactt
ccgcttgctaaaattttaagtgaaatggaagaaattggtatctacactgatgtgaatgat
ttgaagcatatggaaaatgagattcaagaaaaattagatgttcttattaaaaatatacat
gaagctgccggagaagaatttaatattaattcaccaaaacaattaggtgtcgtattattt
gaaacattaaaacttccagtgattaaaaaaacaaaaaccggatattcaacggctgttgat
gtacttgaacaattaaaaggtgagcatccaattattgaacatatcttagaatatagacaa
ctttctaaattacaatctacctacgtagaaggcttacaaaaagtaatcagcaaagataat
agaattcatacgcgcttcaatcaaacgcttgcacaaacaggtcgtttatcaagtgtagat
ccgaacttacaaaatattcctatccgcttagaagaaggtagaaaaattagaaaagcgttt
aaacctacttcagaagatagtgtgatattatcagctgactattcacaaattgaactacgt
gtgcttgcgcatattactcaagatgaaagtttaaaagaagctttcatacatggccatgat
attcatacagctactgcgatgaaagttttcaatgtagaggcaaatgacgtagacagcctt
atgcgtagacaagctaaagctgttaatttcggtattgtttatggaattagtgactatggc
ttaagtcaaagtctaggtattacgcgtaagaaagcgaaagcatttattgatgattattta
gctagtttcccaggcgttaagcaatatatgtcagatatcgtcaaagatgctaaagcgcag
ggttatgttgaaacgctgttacatcgtcgccgttatattccagatattacaagccgaaac
ttcaatttaagaagttttgcagaaagaactgctatgaatactccaattcaaggtagtgca
gcagatattattaaattagctatggttaaatttaatgaaaaggtaaaaaatacgaactac
catgcaaaattattattacaggttcatgatgaattaatctttgaattacctaaatcagaa
gttgaagactttagtgaatttgttgaagaaattatggaaaatgcgcttgatttagatgta
ccgttaaaagtagattcaagctatggaccaacatggtatgatgccaaataa
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