Staphylococcus caprae: DWB96_06880
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Entry
DWB96_06880 CDS
T06252
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scar
Staphylococcus caprae
Pathway
scar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB96_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scar03019
]
DWB96_06880
03400 DNA repair and recombination proteins [BR:
scar03400
]
DWB96_06880
Enzymes [BR:
scar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DWB96_06880
Messenger RNA biogenesis [BR:
scar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWB96_06880
DNA repair and recombination proteins [BR:
scar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DWB96_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
QDW93948
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All DBs
Position
1417860..1419239
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AA seq
459 aa
AA seq
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MLEDKLKDWFGFKTFKPGQKDIIQSVLEGKHTLGILPTGSGKSLCYQFPTYLIEKPTLVI
SPLISLMDDQVMQMKLNGESQVAYIHSGMDEVEKRNNIKRLPQSRFIYLSPEYILQPQNF
KLISRIDFGLIVLDEAHCLSEWGYDFRPHYALIGQIISHFKHARVLALTATAPPHLDEDL
TQILNVKLNVIKTSMSRENISLQHRNFNDDDEKIEWLIPFLNYSGPTIIYISSKKKCLEL
ANLIYDAGFLTGIYHGDLSYQERQTVQQQFLNNDIPVIVATSAFGMGINKKDIRTVIHFH
LSSSPSNYLQEIGRAGRDDKLSQAISLYQPDDRFLLETLLFTYMITDEDISMFELGDFLP
PDKKEILETLYRQFSVSELRSIFKKSYQRKRLGYMRMLGYKDIDQCRRNYLLEFFNEHPD
KPNQCCDNDTDLKEIKNFNRKKVKRKMTYEEKLKNLFEP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgctagaggataaactgaaagactggtttggatttaaaactttcaagcccggccaaaaa
gatattatacaaagcgtcttagaaggcaagcatacattaggcatacttccaactggcagt
gggaaaagtttatgttatcaattcccaacatatcttatcgaaaagccaacgctagtcatc
tcaccacttatttcactgatggatgatcaagtgatgcaaatgaagttaaacggtgaatcg
caagttgcctatatacattctggaatggacgaagttgaaaaaagaaataatatcaaacgg
cttccacaaagtcgctttatatatttgagtccagaatacattttacaaccacaaaacttt
aaattaatttcccgtattgattttggtcttattgtgttagatgaagcacattgcttatcg
gaatggggatatgattttagacctcattatgctttaattggtcagattatctcacatttt
aagcatgctcgtgtgcttgcattaactgcaactgcaccacctcatctagatgaggattta
actcaaatacttaatgtgaaacttaacgtgattaagacaagtatgagtcgcgagaatatt
tctttacaacatagaaattttaatgatgatgatgagaaaatagaatggcttattccattt
ttaaattattcgggccctacaattatctacatatcttctaagaaaaaatgtttagaactc
gcaaatttaatatatgatgcaggatttttaacagggatttatcacggagatttaagttat
caagaacgacagaccgtacaacaacagtttttaaacaatgacatacccgttatcgtcgca
acaagtgcatttggaatgggcattaataaaaaagatatacgcaccgtgattcatttccat
ctttcttcaagtccatcaaactatttacaagaaattggtcgtgctggacgagatgataaa
ttgagtcaggccataagtttatatcaacctgatgatcgctttttattagaaactttattg
tttacatatatgattactgatgaagatatttcaatgtttgaattaggtgatttcttacct
cctgataagaaagaaatcttggaaacgttgtatcgacaattttctgtgagtgagcttaga
agtattttcaaaaagtcataccaacgtaaacgtttaggctatatgcgtatgcttggatat
aaagatatagaccaatgtcgtcgcaactatttactggaattctttaatgaacatccagac
aaaccaaatcaatgttgtgataatgataccgatttgaaggaaattaaaaattttaatcgt
aaaaaagtgaaaagaaaaatgacttatgaagaaaaactcaaaaatttgtttgaaccctag
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