Staphylococcus caprae: DWB96_07865
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Entry
DWB96_07865 CDS
T06252
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
scar
Staphylococcus caprae
Pathway
scar02024
Quorum sensing
scar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB96_07865 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DWB96_07865 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scar03019
]
DWB96_07865 (hfq)
03036 Chromosome and associated proteins [BR:
scar03036
]
DWB96_07865 (hfq)
Messenger RNA biogenesis [BR:
scar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DWB96_07865 (hfq)
Chromosome and associated proteins [BR:
scar03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DWB96_07865 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
DUF4809
MBG
Motif
Other DBs
NCBI-ProteinID:
QDW94133
LinkDB
All DBs
Position
complement(1646055..1646294)
Genome browser
AA seq
79 aa
AA seq
DB search
MIANENIQDQALENFKAEKTEVTVFFLNGFQMKGVIEDFDKYVVSLVSQGKQHLIYKHAI
STFTVDNESEESAEEKSEE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaacgaaaacatccaagatcaagcactagagaactttaaagcagaaaaaact
gaagtcactgtattctttttaaatggctttcaaatgaaaggtgttattgaagactttgac
aaatatgttgtaagtttagtttctcaaggcaaacaacatctgatttacaaacatgcgatc
agcacttttacagttgataatgaatctgaagaatcagctgaagaaaaaagtgaagaataa
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