Staphylococcus caprae: DWB96_07955
Help
Entry
DWB96_07955 CDS
T06252
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
scar
Staphylococcus caprae
Pathway
scar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB96_07955 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scar03019
]
DWB96_07955 (rny)
Messenger RNA biogenesis [BR:
scar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DWB96_07955 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Glt_symporter
Motif
Other DBs
NCBI-ProteinID:
QDW94150
LinkDB
All DBs
Position
complement(1666477..1668036)
Genome browser
AA seq
519 aa
AA seq
DB search
MNLLSLLLILLGIILGVVVGYVVARNLLHQKQVQSRQTAEDIVNHANKEADNIKKEKLLE
AKEENQILREQAESELRERRGELQRQETRLLQKEENLDRKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAILVKEKEKE
AKEKVDKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELDEDITLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLEALSESYDGVEKAFAIQAGREIRVVVSPEEIDD
LKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcctactcattttgctggggattattctaggcgttgttgtaggg
tatgtcgttgcccgaaatttattacaccaaaaacaagttcaatcgagacaaactgccgaa
gatattgtcaatcatgctaataaagaagctgacaatattaagaaagaaaaattactagag
gcaaaagaagaaaaccaaattttaagagaacaagcagaaagtgaactgcgtgaaagacgt
ggtgaacttcaaagacaagaaacccgacttcttcaaaaagaagagaacttggatcgaaaa
tctgatctattagataaaaaagatgagattttagaacagaaagaatcaaaacttgaagaa
agacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctgtaaacgaacaacttcac
agagttgaagaagaactgtcacaagatattgcaatacttgttaaagaaaaagaaaaagaa
gcgaaagaaaaagtagataaaacagcaaaagaattacttgccactacagtacaaagatta
gcagccgatcatacaactgagtcaaccgtttcagttgttaatttacctaatgatgagatg
aaaggtcgaattattggtagagaaggtcgaaatattcgtacattagaaacgcttactggt
atagatttaattattgatgatactccagaagcggttattttatcaggctttgatccaata
cgacgtgaaatagctagaacagcgttagtgaatttagtttcagatggtcgtatccatcct
ggacgtattgaagatatggtcgaaaaagctagaaaagaagttgacgatatcattagagat
gctggtgaacaagctacattcgaaataaatgttcataatatgcatccggatttagttaaa
atacttggtagattaaattaccgtactagttacggtcaaaatgttcttaaacattctatt
gaagtggcgcatctctctggcatgttagcagctgagttagatgaagatatcactttagcc
aaacgtgctggtttacttcatgatgttggtaaagcaattgaccacgaagtagagggaagt
cacgtagaaataggtgttgaattagctaagaaatacggtgaaaatgaaacagtaattaat
gcgatacactcacatcatggcgatgtagaaccgacttctataatttctatattagttgcg
gcggctgatgctttatcagcagctcgaccaggtgcacgtaaagaaacacttgaaaactat
attagaagattagaaagactagaagcgttatcagaaagttatgatggagttgagaaagca
tttgcaattcaagcaggtagagaaataagagtcgttgtctcacctgaagaaattgatgat
ttaaaatcatatagattggctagagatatcaaaaatcaaatcgaagaagaattacaatat
cctggtcacatcaaagtgacagttgttcgtgagactagagcagtagaatatgcaaaataa
DBGET
integrated database retrieval system
