Staphylococcus caprae: DWB96_08020
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Entry
DWB96_08020 CDS
T06252
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scar
Staphylococcus caprae
Pathway
scar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB96_08020 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scar03019
]
DWB96_08020 (pnp)
03016 Transfer RNA biogenesis [BR:
scar03016
]
DWB96_08020 (pnp)
Enzymes [BR:
scar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DWB96_08020 (pnp)
Messenger RNA biogenesis [BR:
scar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DWB96_08020 (pnp)
Transfer RNA biogenesis [BR:
scar03016
]
Prokaryotic type
tRNA degradation factors
DWB96_08020 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
SPATA25
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
QDW94161
LinkDB
All DBs
Position
complement(1681473..1683572)
Genome browser
AA seq
699 aa
AA seq
DB search
MSQEKKVFKTEWAGRSLTIETGQLAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLT
VNYEEKMYAAGKIPGGFKKREGRPGDEATLTARLIDRPIRPLFPKGYRHDVQIMNIVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYVDGNYVINPSVSEKEVSRLDLEVA
GHKDAVNMVEAGASEITESEMLEAIFFGHEEIKRLVAFQQEIIDHIQPVKQEFIPVERDE
ALVEKVKALTEEKGLKDTVLTFDKQQRDENLDALKEEVVEHFIDEEDPDNESLINEVYSI
LNDLVKEEVRRLIADEKIRPDGRKVDEIRPLDSEVGLLPRAHGSGLFTRGQTQALSVLTL
GALGDYQLIDGLGPEVEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DTTDFPYTIRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYT
ILTDIQGMEDALGDMDFKVAGTKEGITAIQMDIKIDGLTREVIEEALEQARQGRLAIMDH
MLQTIDAPRKELSAYAPKVVTMHIKPDKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQEMIDRAKEIIEEITREAEVGQVYHAKVKRIEKYGAFVELFPGKDALLHISQISK
DRINKVEDVLNIGDTIEVKITEIDKQGRVNASHKALTQE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaagaaagttttcaaaactgaatgggctggtcgttctttaactattgag
acaggtcaattagcaaagcaagctaatggtgctgttttagtacgttatggagatacagtt
gtgttatcaactgctactgcttcaaaggaacctagagatggtgactttttcccattaaca
gtcaattatgaagaaaaaatgtatgcggcaggtaaaattcctggtggattcaaaaaaaga
gaaggacgtcctggagatgaagcgacactaactgcacgattaatcgacagacctattcgt
ccattattcccaaaaggttacagacatgatgttcaaattatgaacattgttctaagtgct
gatccagattgttcacctgaaatggctgcaatgattggttcttcaatggctttaagtgtg
tcagacattcctttccaaggacctattgcaggtgtcaatgtaggttatgttgacggtaat
tatgtcatcaacccttcagtttctgaaaaggaagtttctagattagacttagaagtggct
ggtcataaagatgctgtaaacatggtagaagcaggggctagtgaaatcactgaaagcgaa
atgcttgaggcaatcttcttcggacatgaagaaattaaacgtttagttgcattccaacaa
gaaattattgatcatattcaaccagtaaaacaagaatttattcctgttgaacgtgacgaa
gcgctagttgaaaaagtaaaagcattaactgaagaaaaaggtttaaaagatacagtatta
acatttgataaacaacaacgtgatgaaaatttagatgcacttaaagaagaagtcgtagaa
cattttatagatgaagaagatccagacaatgaatctcttatcaatgaagtgtactcaatc
ttgaatgatctcgtaaaagaagaagtaagacgcttaattgctgatgaaaaaattcgtccg
gatggtcgtaaagtagatgaaatacgtccacttgactcagaagttggactcttaccgaga
gctcatggttcaggattatttacacgtggacaaacacaagcactatctgttttaacatta
ggcgcattaggagattatcaactcatcgatggtctaggaccagaagtagaaaaacgcttc
atgcatcattataatttccctaacttctctgttggtgaaacaggccctgttcgtgcgcct
ggacgtcgtgaaattggtcatggtgcattaggtgaaagagctttacgctatatcatccct
gatacaactgattttccatatacaatccgtattgtaagtgaagtattagaatcaaacggt
tcttcttcacaagcatcaatttgtggttctacacttgcgttaatggatgctggtgtacca
attaaagcacctgtagcaggtatagccatgggcctcgttacacgtgatgatagctataca
attttaactgacattcaaggtatggaagatgcacttggtgacatggactttaaagtagcg
ggtactaaagaaggtattactgctattcaaatggatatcaaaattgatggtttaacacga
gaagtaattgaagaagcacttgaacaagctcgtcaaggacgcttagctattatggatcac
atgcttcaaacaatcgatgcaccacgtaaagaattaagtgcttatgctccaaaagttgtt
acaatgcacatcaaacctgacaaaatcagagatgtcattggacctggcggcaaaaaaatc
aatgaaattattgatgaaacaggcgttaaacttgatatcgagcaagatggaacaatcttt
atcggtgctgtagaccaagaaatgattgatcgtgcgaaagaaattatcgaagaaattaca
cgtgaagctgaagttggccaagtatatcatgctaaagttaaacgtatcgaaaaatatggt
gctttcgtagagttattcccaggtaaagatgcgttacttcatatttctcaaatttctaaa
gatagaatcaataaagttgaagatgtattaaatattggtgatacgattgaagtaaaaatt
actgaaatagacaagcaaggcagagtaaatgcttctcataaagctttaacacaagaataa
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