Staphylococcus caprae: DWB96_08035
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Entry
DWB96_08035 CDS
T06252
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scar
Staphylococcus caprae
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scar03016
]
DWB96_08035
Enzymes [BR:
scar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DWB96_08035
Transfer RNA biogenesis [BR:
scar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DWB96_08035
Prokaryotic type
DWB96_08035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDW94164
LinkDB
All DBs
Position
complement(1685406..1686323)
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AA seq
305 aa
AA seq
DB search
MYNGILPVFKERGLTSHDVVFKLRKILKMKKIGHTGTLDPEVNGVLPICLGHATRISDYV
MDMGKTYKATVTLGMSTTTEDQTGDILETKRIKAEDVSEQDIDHTLEQFLGLIKQIPPMY
SSVKVKGKKLYEYARNNEEVERPIRHVYIKSIQRISELTFEGEQCHFDIEVTCGKGTYIR
TLATDIGASLGFPAHMSLLTRIASGGFKQEASLTLDQIKVLHEHDSLQEKLFPIEYGLKG
LQHIEVSDDELKKRILNGQKFNSHEFQYEFEEQFVFIDNHTNKALAIYMIHPEKAHEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggtatattacctgtatttaaagaaagaggtttaacaagccacgatgttgtt
tttaaactaagaaagattttaaaaatgaagaaaattggacatacgggtacacttgatcct
gaagtaaatggtgtacttccaatttgtttaggtcatgctacgaggatcagtgattacgtg
atggatatgggtaaaacgtataaagcaactgtcacactaggcatgagtacgactactgaa
gatcaaacaggggatatattagaaactaagcgtattaaagcagaagatgtttcagaacaa
gacatagatcatacgcttgagcaatttttaggtcttataaaacaaattccccctatgtat
tcttcagtgaaggttaaaggtaaaaagctatacgaatatgctcgaaataatgaggaagta
gaaagaccaatcaggcacgtctatatcaaatctattcaaagaatttctgaactaaccttc
gaaggtgaacagtgtcatttcgatattgaagttacatgtggtaagggtacgtatattaga
actttagctactgatattggtgccagtcttggctttcctgcgcatatgtcacttttaact
cgcatcgcttcaggcggttttaagcaagaggccagtttaacacttgatcaaattaaagta
ttgcatgagcatgattcattacaagaaaagttgtttcctatagaatatggtttgaaagga
ttacaacacattgaagtcagtgatgatgaactcaagaagcggatcttaaatggtcagaaa
ttcaatagtcatgaatttcagtatgaatttgaggagcaatttgtgtttatcgataaccac
acaaataaagcgcttgctatatatatgattcatccggaaaaagcgcacgaaattaaaccg
aaaaaagtttttaactaa
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