Staphylococcus caprae: DWB96_08140
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Entry
DWB96_08140 CDS
T06252
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scar
Staphylococcus caprae
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scar03032
]
DWB96_08140
03400 DNA repair and recombination proteins [BR:
scar03400
]
DWB96_08140
Enzymes [BR:
scar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DWB96_08140
DNA replication proteins [BR:
scar03032
]
Prokaryotic type
DNA Topoisomerases
DWB96_08140
DNA repair and recombination proteins [BR:
scar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DWB96_08140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
Cys_rich_CPXG
Porphyrn_cat_1
Motif
Other DBs
NCBI-ProteinID:
QDW94184
LinkDB
All DBs
Position
complement(1710093..1712162)
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKRYKVIASMGHVRDLPRSQMGVDTEDNYEPKYITIRGK
GPVVKDLKKHAKKAKKVFLASDPDREGEAIAWHLSKILELEDSKENRVVFNEITKDAVKD
SFKHPREIEMELVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWTIEGEFRYKKSKFNAKFLHYKNKPYKLNKKEDVEKITAALDGDQFEITN
VNKKEKTRNPANPFTTSTLQQEAARKLNFKARKTMMLAQQLYEGIDLKRQGTIGLITYMR
TDSTRISDSAKAEAKNYITDKYGKEYISKRKATGKQGDQDAHEAIRPTSALRTPDDMKPY
LTRDQHRLYKLIWERFVASQMAPAILDTIALDVTQNDIKFRANGQTIKFKGFMTLYVEAK
DDKDNEKENKLPKLEEGDKVTATQIEPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKLESKRFVPTELGEIVYEQVKEYFPEIIDVEFTVNMETLLDKIAEGDMN
WRKVVGDFYNSFKQDVERAEEEMEKIEIKDEPAGEDCEVCGAPMVIKMGRYGKFMACSNF
PDCRNTKAIVKSIGVKCPKCNEGDVVERKSKKNRVFYGCSRYPDCDFISWDKPVGRDCPK
CNHYLVDKKKGRSSQVVCSNCDYQEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatttagtcatagttgaatcgcctgcaaaagctaaaaccattgaaaaatat
ttaggaaaaagatataaagttattgcttcaatgggacacgttcgtgacttacctagaagt
caaatgggtgtggacactgaagataactatgaaccaaaatatattacaattcgcggtaaa
gggccggtcgtcaaagatttaaagaaacatgcgaagaaggcaaaaaaagtttttcttgca
agtgaccctgaccgtgaaggtgaagcgattgcctggcatttatcaaaaatcttagaatta
gaagattcaaaagaaaacagagtcgtatttaatgaaattactaaagatgcggttaaagat
agttttaaacatccgagagaaattgaaatggaactcgtggatgcacaacaagcccgtcgt
attttagatagattagtaggctataatatttctcctgttctatggaagaaagtgaagaag
ggattatctgcaggacgtgtccaatcagtagcacttcgtttggttatcgatcgagaaaat
gaaattagaaatttcaaacctgaagaatattggacaattgaaggcgaattcagatataaa
aaatctaaatttaatgccaaattccttcattataaaaataagccatataaattaaataaa
aaagaagatgttgaaaagattactgcagcactggatggagatcaattcgaaattacgaat
gtaaataagaaagaaaaaacacgtaatccagcaaatccatttactacttcaacgcttcaa
caagaagctgcacgtaaattaaactttaaagcacgtaaaacaatgatgttagcacaacaa
ttatatgaaggtattgatttaaaacgtcaaggtactattggtttaatcacttatatgcgt
acggattctactcgtatatctgactcagcaaaagctgaggcgaagaattatattactgat
aaatacggtaaagagtatatttcaaaacgtaaggcaactggtaaacaaggtgatcaagat
gctcacgaagcaattagacctacaagtgctttaagaacaccagatgatatgaaaccatat
ttgactagagatcaacatcgtttgtataaattgatatgggaacgatttgtagcaagtcaa
atggctccagctatactagatactatcgcgttagacgtcactcagaatgacattaaattc
agagctaatggacaaactattaaatttaaaggtttcatgacgttgtacgtggaagctaaa
gatgacaaagataatgagaaagagaacaaacttccgaaacttgaggaaggagataaagtt
acagctactcaaatcgaacctgctcaacactttactcaaccacctcctcgttatactgaa
gcacgtttagttaaaactttagaagagttgaaaattggtagaccttctacttatgcacca
acaatagataccattcaaaaacgaaattacgttaaattagaaagtaaacgttttgttcct
accgagttaggagaaatcgtttatgagcaagtgaaagaatacttcccagaaattattgat
gtagagtttacagttaatatggaaacattactagataaaattgcggaaggcgacatgaat
tggcgtaaggttgttggtgatttctacaatagtttcaaacaagatgttgagcgcgctgaa
gaagaaatggagaaaatagaaattaaagatgagcctgctggagaagattgtgaagtatgt
ggtgctccgatggtaatcaaaatgggacgctatggtaaatttatggcttgttcgaatttc
cctgattgccgaaatacaaaggctattgttaaatctataggcgtgaaatgtccaaaatgt
aatgaaggagacgttgtagaacgtaaatccaaaaagaacagagtcttttatggttgttcc
agatatcctgattgtgactttatttcttgggacaaaccagttggcagagattgtccaaaa
tgtaaccattacttagttgataagaaaaaaggtagaagtagtcaagttgtatgttcaaat
tgtgactatcaagaagaagttcaaaaatag
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