Staphylococcus caprae: DWB96_11975
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Entry
DWB96_11975 CDS
T06252
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
scar
Staphylococcus caprae
Pathway
scar00750
Vitamin B6 metabolism
scar01100
Metabolic pathways
scar01240
Biosynthesis of cofactors
Module
scar_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
scar00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DWB96_11975
Enzymes [BR:
scar01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DWB96_11975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
IGPS
NMO
NanE
TMP-TENI
OMPdecase
DUF561
TetR_C_27
FMN_dh
IMPDH
TIM
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
QDW94918
LinkDB
All DBs
Position
complement(2463815..2464702)
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AA seq
295 aa
AA seq
DB search
MSKIVGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVA
RMANPKIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKD
QFTVPFVCGCRNLGEAARRIGEGSAMLRTKGEPGTGNIVEAVRHMRRVNAEVSRLTVMND
DEIMTFAKELGAPFEILKQIKDKGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLEERMQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattgttggctcagaacgagtaaaaagaggaatggctgaaatgcaaaaaggt
ggcgtcattatggacgttgtcaatgcagaacaagctaagattgctgaagaagcaggtgcg
gttgcagttatggcactagaacgcgttccatcagacatcagagcagcaggcggtgtagca
cgcatggctaatcctaaaattgttgaggaagtaatgaacgcagtgtcaatacctgttatg
gctaaagcccgcattggacatattactgaagctagagtattagaagcaatgggtgtcgat
tacattgatgaatctgaagtattaactccagctgatgaagaatatcacttaagaaaagat
caatttacagtaccttttgtatgcggatgtcgtaacctaggtgaagctgcacgccgtatt
ggtgagggatcagcaatgttacgaactaaaggtgaaccaggtacaggtaatattgttgaa
gctgttcgtcatatgcgccgtgtaaatgctgaagtgagtcgtctgactgttatgaacgat
gatgaaatcatgacatttgcgaaagaattaggtgcgccttttgaaatattaaagcaaatt
aaggataaaggtcgtcttccagtagttaactttgcagcaggtggtgtagcaacgccccaa
gatgctgctttaatgatggaattaggtgccgacggtgtattcgtaggatcaggtattttc
aaatcagaagatcctgaaaaatttgctaaagcaattgtacaagctacaacacattatcaa
gattatgaactgattggtaaattagcaagtgagcttggcacagctatgaaaggtttagat
attaaccaaatttcattagaagaacgtatgcaagagcgtggttggtaa
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