Saccharolobus caldissimus: SACC_01380
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Entry
SACC_01380 CDS
T07710
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
scas
Saccharolobus caldissimus
Pathway
scas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SACC_01380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scas03021
]
SACC_01380
Enzymes [BR:
scas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SACC_01380
Transcription machinery [BR:
scas03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SACC_01380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Zn_ribbon_3
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
BDB97121
UniProt:
A0AAQ4CMU0
LinkDB
All DBs
Position
complement(115847..118489)
Genome browser
AA seq
880 aa
AA seq
DB search
MSEKIIKGIKFGILSPDEIRKMSVTAIITPDVYDEDGTPIEGSVMDPRLGVIEPGQKCPT
CGNTLGNCPGHFGHIELVRPVVHVGFVKHIYDFLRATCRRCGRIKIAEEEIEKYARIYNA
IKKRWPSAARRLTEYVKKTAIKAQVCPHCGEKQYKIKLEKPYNFYEERKEGVVKLTPSDI
RERLEKIPDSDVEILGYDPKTSRPEWMILTVLPVPPITIRPSIMIESGIRAEDDLTHKLV
DIVRINERLKESIDAGAPQLIIEDLWDLLQYHVATYFDNEIPGLPPSKHRSGRPLRTLAQ
RLKGKEGRFRGNLSGKRVDFSSRTVISPDPNISIDEVGIPEIVAKTLTVPERVTTWNIER
LRQFVINGPDKWPGANYVIRPDGRRIDLRYVKDRKELASTLAPGYIVERHLVDGDIVLFN
RQPSLHRISMMAHRVKVLKGLTFRLNLLVCPPYNADFDGDEMNLHVPQSEEAIAEAEEIM
LVHKNIITPRYGGPIIGAAQDYISGAYLLTLKTTLLTKEEAQDILGVADVKIDLGEPAIL
APKEYYTGKQIVSAFLPSDFNFHGQANISSGSRLCKNEDCPHDSYVVIKNGKLLEGVFDK
KAIGNQQPESILHWLVKEYSNEYGKWLMDNLFKVFIRFIELQGFTMRLEDVSLPIEVKKE
IYNEIDKAKVEVNNLIEKYKNGELEPIPGRTLEESLENYILDTLDKLRSTAGDIASKYLD
PFNYAYIMARTGARGSVLNITQMAAMLGQQSVRGERIKRGYMTRTLPHFKPNDISPEARG
FIYSSFRSGLSPIELFFHAAGGREGLVDTAVRTSQSGYMQRRLINALSDLRVEYDGTVRS
LYGEVIQIAYGDDGIFPMYSAHGKTIDVNRILERVVGWKI
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaataataaaaggaataaaattcggtatattatctccagacgaaataaga
aaaatgtcagttaccgcaattataacgccagatgtatatgatgaggatggaactccaata
gaaggtagtgtaatggatcctagattaggagttattgagcctggtcaaaaatgtcctaca
tgcgggaacacattaggaaattgtccggggcattttggacatatagaattagttagacca
gttgttcatgtaggatttgttaaacatatctatgattttctaagggctacatgtagaaga
tgtggtaggataaaaattgctgaagaagaaattgaaaaatatgctagaatatataatgct
ataaagaaaagatggccttctgctgctaggaggttaacagaatatgtaaagaaaactgct
attaaagctcaagtttgtcctcactgtggtgagaaacagtataaaataaaactagaaaaa
ccttataatttttatgaagaaagaaaagaaggagtagtgaaattaacaccatcagatata
agagaaagattagagaagattccagattcagatgtggaaattttaggatatgatcctaaa
actagcagaccagaatggatgatattgacagtcttacctgtaccacctataactataagg
ccttccataatgatagaaagcggtataagagcagaggacgatttaactcataaattagta
gatatagttagaataaatgaaaggttaaaggagagtattgatgcaggtgctccacaatta
ataatagaagatttatgggatcttctccaatatcatgttgcaacatactttgacaatgaa
attccaggcttaccaccttctaagcatagatctggaagaccactaagaactttagctcag
agattaaagggaaaagaaggtagatttagaggtaatttatcaggaaaaagagtggacttt
tcatcgagaaccgtaatttcgccagatccaaatattagcattgatgaggtaggaatacca
gaaattgtggctaaaacacttacagtaccagaacgagttacgacatggaacatagaaaga
ttaaggcagtttgttataaatgggcctgataaatggccaggtgcaaattatgtaataagg
cctgatggtagaagaattgatttaagatacgttaaggatagaaaagagctagcttctact
ttagcaccaggatatatagtagaaagacatttagttgacggggatattgtgctatttaat
aggcagccctctctacataggatttcaatgatggctcatcgtgttaaagtgttaaaagga
ttgacttttaggcttaatttattagtatgtccaccttataatgccgattttgacggcgat
gagatgaatttacatgtacctcagtcagaagaagctatagccgaagctgaggaaataatg
cttgtacataagaacattataacacctagatatggtggtcctataattggtgcagcccaa
gattatataagtggtgcttatttgctaacgttaaagactacgttgttaacaaaagaagaa
gctcaagacattttgggtgtagctgacgtgaagatagatctaggagaacccgcaatatta
gcacctaaagaatattatactgggaagcaaatagttagtgcatttcttcctagcgatttc
aatttccatggtcaagcaaatataagcagcggctctagactgtgtaagaacgaagattgt
cctcatgactcctatgtggtaattaaaaatggaaaattgcttgagggtgtatttgataaa
aaggctatagggaatcaacagccagaaagtatactccattggttagttaaagagtattca
aatgagtatggaaagtggttaatggataatttgtttaaagtatttattagatttattgaa
ttgcaaggttttactatgagacttgaggacgtgtctttgcctatagaggtaaagaaagaa
atttataacgagatagataaagctaaagttgaagttaataatttgatagaaaagtataaa
aatggagaattagaaccaataccaggtagaacattagaggagagcttagaaaactatata
ttagatacattagataaattaagaagtactgcgggtgatatagcaagtaaatatctagac
ccatttaattatgcttatataatggcaagaacgggggctagaggtagtgtattgaatata
actcagatggcggcaatgttaggacaacaatcggttagaggcgaaaggattaaaagaggt
tatatgactagaactttgcctcattttaaacctaatgatatttcaccagaagctagaggt
tttatatattcgtcatttagaagtggattatccccaattgaattattcttccacgcagca
ggaggtagagaagggctagtagatactgcagtgaggacttcgcagagtggatatatgcaa
agaaggttaattaatgcattatcagatcttagagttgaatatgatggcacagtaagaagt
ttgtatggcgaagttatccagatagcttatggagatgatggtattttccccatgtattca
gctcatggtaaaacgatagacgtaaatagaattttggaaagagttgtggggtggaaaata
tga
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