Saccharolobus caldissimus: SACC_01990
Help
Entry
SACC_01990 CDS
T07710
Name
(GenBank) transcription factor
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
scas
Saccharolobus caldissimus
Pathway
scas03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scas00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SACC_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scas03021
]
SACC_01990
Transcription machinery [BR:
scas03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
SACC_01990
Prokaryotic type
Archaeal type
TFE
SACC_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
HTH_20
HTH_9
TrmB
HTH_IclR
Fe_dep_repress
Zn_ribbon_IS1595
GntR
HTH_36
HTH_Crp_2
HTH_11
HTH_5
Sigma70_r3
HTH_12
Rad50_zn_hook
Zn_Ribbon_TF
DUF7342
HTH_DeoR
HypA
DUF4423
EAD9
DnaD_N
HVO_2753_ZBP
MarR_2
Zn_ribbon_10
zf_C2H2_10
zf-C2H2_FBX41
FaeA
Rrf2
IBR_1
Zn_ribbon_TFIIB
TSKS
Zn_ribbon_16
Glyoxalase_4
Zn_ribbon_ACC
Motif
Other DBs
NCBI-ProteinID:
BDB97182
UniProt:
A0AAQ4CN01
LinkDB
All DBs
Position
171974..172510
Genome browser
AA seq
178 aa
AA seq
DB search
MVNAENLFINLAKSLLGDEVVDVLEVLLEKGTEMTDEEIANHLNVKVNDVRKKLNLLEEQ
GFVSYRKTRDKDSGWYIYYWRPNIDQINEILLNRKRLILDKLKTRLEYEKNNTFFICPQD
NSRYSFEEAFENEFKCPKCGSQLSYYDSEKIRTFLEQKIKQIEEEIEKETKLGANRSS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
gtggttaatgctgaaaacttgtttataaatttagcaaaaagtcttttaggtgatgaggtc
gttgatgtgcttgaagttttgctagaaaaaggaactgaaatgacggatgaggaaatagca
aatcaccttaacgtgaaagtaaatgatgttagaaaaaaattaaacctcttagaggagcag
ggatttgtaagttataggaaaactagggataaggatagtgggtggtatatatattactgg
agacctaatatagatcagattaatgaaatcttattaaatagaaagagacttatattagat
aagctgaaaacccgtttagagtatgagaaaaataatacattttttatatgcccacaagat
aatagccgatactcgtttgaggaagcatttgaaaatgagtttaaatgtcctaaatgtggc
tcacagttatcatattatgattcagagaaaataagaacatttttagagcagaaaataaag
caaatagaagaggaaatagagaaggagactaaacttggggcaaataggagtagttga
DBGET
integrated database retrieval system