KEGG   Saccharolobus caldissimus: SACC_06130
Entry
SACC_06130        CDS       T07710                                 
Name
(GenBank) DNA-binding protein
  KO
K15171  transcription elongation factor SPT4
Organism
scas  Saccharolobus caldissimus
Brite
KEGG Orthology (KO) [BR:scas00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    SACC_06130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scas03021]
    SACC_06130
   03019 Messenger RNA biogenesis [BR:scas03019]
    SACC_06130
Transcription machinery [BR:scas03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     SACC_06130
  RNA polymerase I system
     SACC_06130
Messenger RNA biogenesis [BR:scas03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     SACC_06130
SSDB
Motif
Pfam: Spt4 Zn_ribbon_3 DZR Zn_ribbon_15 zf-ChsH2 Zn_Ribbon_1 Zn_Ribbon_TF DZR_2 zf-C3HC4_3 HypA Zn_ribbon_RRN7 NRDD RecR_ZnF RUBY_RBDX UPF0547
Other DBs
NCBI-ProteinID: BDB97596
UniProt: A0AAQ4CP65
LinkDB
Position
complement(533832..534032)
AA seq 66 aa
MARKSIFKACKNCKALVSPEQEVCPICGSSSFSDDWEGVIIIINTDSEVAKIAEVQKPWR
YAIIVK
NT seq 201 nt   +upstreamnt  +downstreamnt
atggcaagaaaatctattttcaaagcatgtaaaaactgtaaggcattagtttcaccagaa
caagaagtttgtccaatatgtggaagttcaagctttagtgacgattgggaaggagttata
attattataaatactgattctgaagtagctaaaatagctgaggtacaaaaaccttggaga
tatgcaataatagtaaagtag

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