Saccharolobus caldissimus: SACC_06360
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Entry
SACC_06360 CDS
T07710
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scas
Saccharolobus caldissimus
Brite
KEGG Orthology (KO) [BR:
scas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scas03016
]
SACC_06360
Enzymes [BR:
scas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SACC_06360
Transfer RNA biogenesis [BR:
scas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SACC_06360
Prokaryotic type
SACC_06360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
PUA
TruB_N
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BDB97619
UniProt:
A0AAQ4CP88
LinkDB
All DBs
Position
552465..553184
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AA seq
239 aa
AA seq
DB search
MSYVTKGGKEYICIMQVHCEFDREELSRIILSFKGEIYQRPPVRSSVKRRLRIRTIYDIE
VLDIEDKLVLLRVSSDSGTYMRKLCHDIGVIYGCGAHMRELRRIKSGIFTEYTNLVKLHE
LSEAIYMYKMCKDESDLRKVLMPMEFATCGIPKVLIEDTAVNALAYGAPLAIPGIVAYQK
FAQNQKIAILTLKGELVAIGTATHDSSELQKAKKGIIAILDRVFMQRDIYPKAWKKHER
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgtaactaaaggtggaaaagaatacatatgcataatgcaggtgcattgtgaa
tttgatagagaggaattatcaagaataattttaagttttaaaggagaaatatatcaaaga
cctccggttagatcttcagttaagaggagattaagaataagaaccatctatgatattgag
gtattagatattgaagataagttagttctgttaagagtaagctctgattctggcacttac
atgagaaagctttgtcatgacataggtgtaatttacggatgtggagctcatatgagagag
ctaagaaggattaagtctggaattttcacagagtataccaatctagtaaagctacatgag
ctatcagaggcaatatacatgtataaaatgtgcaaagatgaaagtgatttaagaaaagta
ttaatgccaatggagtttgcaacttgtggaatcccaaaagttttaatagaggatacagca
gtaaatgctttagcttatggcgctccattagcaataccagggatagtagcgtatcaaaaa
tttgctcaaaatcaaaaaatagcaatattaacacttaagggtgagctagttgcaataggc
actgctactcacgattcatcagaactccaaaaagctaaaaaaggcattatagctatctta
gatagagtttttatgcagagagatatatatccaaaggcatggaagaaacatgagagatga
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