Saccharolobus caldissimus: SACC_26320
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Entry
SACC_26320 CDS
T07710
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
scas
Saccharolobus caldissimus
Pathway
scas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SACC_26320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scas03019
]
SACC_26320
Messenger RNA biogenesis [BR:
scas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SACC_26320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
BDB99615
UniProt:
A0AAQ4CUY4
LinkDB
All DBs
Position
complement(2406822..2408093)
Genome browser
AA seq
423 aa
AA seq
DB search
MEYKYGNTLIRIKQGYREIGGNFIIIEDKDNTLVFDQGIRFSRFKKYYNVNIQPSSASEL
RRLGIIPPSDEFNKIYISHLHLDHLGVLHLLNVGTLLHVPDKDTFNQFIEPYKESDNWTT
YISPPLGVNVIDIRDNQDGVLPLQVEHSAYPAYSFYYNNGDVRILYSGDLRLSSPLKVAD
QELHDRIHEKTLLEEYEERGLDTDVLIIEGTNFSSAISPLQPHYFNEQVNNIFENHGNSL
IMVSIDPIDLEELAYLLLVAKEKGRIPVFSGRRLIKMASFWISKFNLTDKAYQFDDKSIE
FEIIDEEEIIRSPQDYVIFTVKGNLIDFGRRLSEIIKGSAVISLSTESKAESGEDESVED
NWYKALGFIIYRLRISGHYYPYELRTILEYIKPKKVIPIHTEAPLTMCEYINKLGYSCAE
NLP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagtataaatacgggaatactctgatcagaatcaaacaaggatatagagaaattggt
ggtaattttattataatagaagataaggacaataccctagtctttgaccaagggataaga
ttttcgaggtttaaaaaatattataacgttaatattcaaccatcaagtgcctcagaatta
aggaggctagggatcataccaccatctgatgaatttaacaagatttatatatctcactta
cacctagatcacttaggggttctacacttattaaatgtaggcacgttattacatgtacca
gataaagatacttttaatcaattcatagaaccgtataaagaatctgacaactggactaca
tatatatctcctcctctaggtgttaacgtaattgatataagagataatcaagatggggta
ttgccattgcaagtcgaacatagtgcttacccagcctattcgttctattataataacggg
gacgttagaatattgtactctggtgacttaagactttcatctcctctaaaagtagcagat
caagagttacacgatagaattcacgaaaaaactcttcttgaggaatacgaagagagggga
ttagatactgacgtattaataatagagggaacgaacttctcctctgctatctctccttta
cagccccattattttaacgagcaagttaataatatcttcgaaaatcatggtaattcacta
atcatggtctctatagatcctatagatctagaagagctcgcatatcttcttctagttgct
aaagagaaaggcagaattccagtgttttctggacgcagattaataaaaatggctagcttc
tggatatcaaaatttaatctaacagataaagcttatcagtttgatgataaaagcatagaa
tttgaaataatagatgaagaggagataattagatctccacaggattatgttatatttaca
gttaaggggaacctaatagactttggaaggagattaagtgaaataattaagggctctgca
gttatatcactatccacagaaagtaaggctgaaagtggagaagatgaaagtgtagaggat
aattggtataaggctttaggctttataatctataggttgagaatctccggtcattactat
ccatatgagttaaggactatattagaatacattaaacctaagaaggtaatcccaatacat
acagaagccccactaaccatgtgcgaatacataaataaattaggttatagttgtgcagag
aatcttccgtaa
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