Streptomyces castrisilvae: P8A18_06540
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Entry
P8A18_06540 CDS
T10534
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scat Streptomyces castrisilvae
Pathway
scat00040
Pentose and glucuronate interconversions
scat01100
Metabolic pathways
scat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
P8A18_06540
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P8A18_06540
Enzymes [BR:
scat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
P8A18_06540
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WLQ33126
LinkDB
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Position
complement(1554667..1556001)
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AA seq
444 aa
AA seq
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MSTRRMRARAIAVAMGCASLSLALSIPAQATTPHSGTRGIDRAVLAKGDGWAAAEGSTTG
GAAATPDHVYTVHNRAELIAAFKDAGDAPKIVRIDGTIHGNADAEGNPIDCEAYQTDGYT
LDKYLAAYDPDTWGREEVPSGPLEDARLASAKLQKAAVNVYVPSNTTLVGVGRNATVIGA
GIQIQNVSNVIVRNISFEDTYDCFPQWDPTDGDTGHWNSEYDNLVVYGSDHVWVDHNTFS
DGDRPDADQPSYFNELYQQHDGLFDIVKGADLVTVSWNVLKDHDKTMLLGNSDGAGDTDR
GKLRVTLHHNLFKDVNERAPRVRFGQVDSYNNYFVATRGSVYGYSFGVGAESHLVAEHNA
FTLSGEFDKAKILKKWSESSLTAGDNYVNGRRTDLIAVHNAGVPEEHLTSGAGWTPTLRN
RIDHPLLVPLVVGIGAGTGRLPGA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacgcagaatgcgcgcccgtgccatcgccgtcgcgatgggctgcgcgtcgctg
tcccttgccttgagcatccccgcccaggccaccaccccgcactccggcacgaggggcatc
gatcgcgccgtcctcgccaagggcgacggctgggccgccgccgagggctccacgaccggc
ggtgccgccgccacccccgaccacgtttacacggtgcacaaccgcgccgaactcatcgcc
gccttcaaggacgcgggcgacgccccgaagatcgtccggatcgacggcaccatccacggc
aacgccgacgccgagggcaacccgatcgactgcgaggcgtaccagaccgacggctacacg
ctggacaagtacctcgccgcctacgaccccgacacctggggccgcgaggaggtcccctcc
ggcccgctggaggacgcccggctcgcctccgccaagctccagaaggccgccgtcaacgtc
tacgtcccgtccaacaccacgctcgtcggcgtcggccggaacgccacggtcatcggcgcc
ggcatccagatccagaacgtctccaacgtcatcgtccgcaacatctccttcgaggacacc
tacgactgcttcccgcagtgggacccgaccgacggcgacaccggccactggaactccgag
tacgacaacctcgtcgtctacggctccgaccacgtctgggtcgaccacaacaccttcagc
gacggcgaccgccccgacgccgaccagccctcctacttcaacgagctgtaccagcagcac
gacggcctcttcgacatcgtcaagggcgccgacctcgtcaccgtctcctggaacgtcctc
aaggaccacgacaagacgatgctcctcggcaacagcgacggcgccggggacaccgaccgg
ggcaagctccgcgtcaccctgcaccacaacctcttcaaggacgtcaacgagcgcgcgccc
cgcgtccgcttcggacaggtcgactcgtacaacaactacttcgtcgccacccggggcagc
gtctacggctactccttcggggtcggcgccgagtcgcacctcgtcgccgagcacaacgcg
ttcacgctgagcggcgagttcgacaaggcgaagatcctcaagaagtggtccgagtcctcg
ctcacggccggcgacaactacgtcaacggccgccggaccgacctgatcgccgtccacaac
gcgggcgtccccgaggagcacctcacctcgggcgccggctggaccccgaccctgcgcaac
cggatcgaccacccgctgctcgtccccctcgtcgtgggcatcggagcgggcaccggccgg
ctgcccggcgcctga
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