Streptomyces castrisilvae: P8A18_16425
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Entry
P8A18_16425 CDS
T10534
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
scat Streptomyces castrisilvae
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scat03032
]
P8A18_16425 (gyrB)
03400 DNA repair and recombination proteins [BR:
scat03400
]
P8A18_16425 (gyrB)
Enzymes [BR:
scat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
P8A18_16425 (gyrB)
DNA replication proteins [BR:
scat03032
]
Prokaryotic type
DNA Topoisomerases
P8A18_16425 (gyrB)
DNA repair and recombination proteins [BR:
scat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P8A18_16425 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WLQ34922
UniProt:
A0ABY9HK74
LinkDB
All DBs
Position
complement(3801556..3803643)
Genome browser
AA seq
695 aa
AA seq
DB search
MLCQKGRFVADSGNPNENIPSTPGESGAAPVQGEVKASYDASAITVLEGLDAVRKRPGMY
IGSTGERGLHHLVQEVVDNSVDEAMAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEG
KPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTRVAVDVKTDGYRWTQDYKF
GVPTAPLARNEATEETGTTVTFWADGDIFETTEYSFETLSRRFQEMAFLNKGLTLKLTDE
RESAKATAGADNAEAGEVPEEESARSVTYHYENGIVDFVRYLNSRKGDVIHQSVIDIEAE
DKDRLLSVEIAMQWNTQYSEGVYSFANAIHTHEGGTHEEGFRAALTSLVNRYARDKKLLR
EKDDNLTGEDVREGLTAIISVKLGEPQFEGQTKTKLGNTEAKTFVQKVVHEQLTDWFDRN
PNEAADIIRKGIAASTARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVE
GDSAGGSAKSGRNPMYQAILPIRGKILNVEKARVDKILQNTEVQALISAFGTGVHEDFDI
EKLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVEAGHVYLSRPPLYKIKWGRDDFE
YAYSDRERDALVELGKQNGKRIKEDSIQRFKGLGEMNAEELRVTTMDVDHRVLGQVTLDD
AAQADDLFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacattccg
tccactcccggcgagagcggcgctgctcccgtccagggcgaggtgaaggcgtcgtacgac
gccagtgcgatcaccgtgctggagggcctggacgcggtccgcaagcgacctggtatgtac
atcggctcgaccggtgagcgcggtctccaccacctcgtgcaggaggtcgtcgacaactcg
gtcgacgaggccatggccgggcacgcggacaccatcgacgtcacgatcctcgccgatggc
ggggtgcgcgtggtcgacaacggccgtggcatcccggtcggcatcgtgccgtccgaaggc
aagccggccgtcgaggtcgtcctcaccgtcctgcacgcgggcggaaagttcggcggcggc
ggctacgccgtctccggtggtctgcacggcgtcggtgtgtccgtcgtcaacgccctgtcc
acccgggtcgccgtcgacgtcaagacggacggctaccgctggacccaggactacaagttc
ggcgtcccgacggccccgctggcccgtaacgaggcgaccgaggagacgggcaccaccgtc
accttctgggccgacggcgacatcttcgagacgaccgagtactccttcgagacgctctcg
cgccgcttccaggagatggccttcctcaacaagggcctcaccctcaagctgaccgacgag
cgcgagtcggcgaaggcgacggcgggcgcggacaacgccgaggcgggcgaggtccccgag
gaggagagcgcccgctcggtcacgtaccactacgagaacggcatcgtcgacttcgtccgg
tacctcaactcccgcaagggcgatgtcatccaccagtcggtgatcgacatcgaggccgag
gacaaggaccgtctgctgtcggtcgagatcgccatgcagtggaacacgcagtacagcgag
ggggtctactccttcgccaacgcgatccacacgcatgagggcggtacgcacgaggaaggc
ttccgcgccgcgctgacctccctggtcaaccggtacgcgcgcgacaagaagctgctgcgc
gagaaggacgacaacctcaccggcgaggacgtccgcgagggtttgacggcgatcatttcg
gtgaagctgggcgagccgcagttcgagggtcagacgaagaccaagctgggcaacacggag
gccaagaccttcgtgcagaaggtcgtccacgagcagctgacggactggttcgaccgcaac
cccaacgaggcggccgacatcatccgcaagggcatcgccgcctcgaccgcccgtgtggcg
gcccgcaaggcgcgcgacctgacgcggcgcaagggcctgctggagagtgcctcactgccc
ggcaagctcagcgactgccagtcgaacgatcccaccaagtgcgagatcttcatcgtcgag
ggtgactccgccggcggctcggccaagtccggccgcaacccgatgtaccaggcgatcctg
ccgatccgaggcaagatcctgaacgtcgagaaggcccgggtcgacaagatcctgcagaac
accgaggtccaggcgctgatctcggccttcggcaccggggtccacgaggacttcgacatc
gagaagctccgctatcacaagatcattctgatggcggacgccgatgtcgacggccagcac
atcaacaccctgctgctgacgttcctgttccgcttcatgcgcccgctggtcgaggccggg
cacgtctacctctcgcgtcccccgctctacaagatcaagtggggtcgggacgacttcgag
tacgcgtactcggaccgtgagcgcgacgccctggtggagctcggcaagcagaacggcaag
cggatcaaggaagactcgatccagcgcttcaagggtctcggcgagatgaacgccgaggag
ctgcgcgtcaccacgatggacgtcgaccaccgggtgctcggccaggtcacgctcgatgac
gcggcgcaggccgacgatctgttctcggtgctgatgggtgaggacgtcgaggcacggcgc
tcgttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
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