Streptomyces castrisilvae: P8A18_20280
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Entry
P8A18_20280 CDS
T10534
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scat Streptomyces castrisilvae
Pathway
scat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A18_20280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scat03019
]
P8A18_20280 (recQ)
03400 DNA repair and recombination proteins [BR:
scat03400
]
P8A18_20280 (recQ)
Enzymes [BR:
scat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8A18_20280 (recQ)
Messenger RNA biogenesis [BR:
scat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8A18_20280 (recQ)
DNA repair and recombination proteins [BR:
scat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8A18_20280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
DNAPolymera_Pol
Motif
Other DBs
NCBI-ProteinID:
WLQ38213
UniProt:
A0ABY9HUF2
LinkDB
All DBs
Position
4673777..4675879
Genome browser
AA seq
700 aa
AA seq
DB search
MTTDVTTGGAAGATESEARRTLHRVFGYEAFRGEQEAVVDHVVAGGDAVVLMPTGGGKSL
CYQIPALVRRGTGIVISPLIALMQDQVDALRALGVRAGFINSTQDFDERRSMEAQFVAGE
LDLLYLAPERLRLDATLALLSRGEVSVFAIDEAHCVAQWGHDFRPDYLALSVLGERWPDV
PRIALTATATDATHREITQRLGMPDARHFVASFDRPNIQYRIVGKADPKKQLLSFLKEEH
AGDAGIVYCLSRASTEKTAEYLCRNGIEAVPYHAGLDAGTRAVHQSRFLREEGLVVVATI
AFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGAPSTAWMAYGLQDVVQQRKLIQG
GEGDESFRRRAASHLDSMLALCETAQCRRAQLLTYFGQDPTAASCGNCDTCLTPPETWDG
TVVSQKLLSTVVRLKRERGQKFGAGQIIDILLGRRTAKIIQFDHDQLSVFGIGDELAEAE
WRGVVRQLLAQGLLAVEGEYGTLVLTEESGAVLGREREVQLRKEPKKPTASRSSSRGERK
GKAAVAADLPGTAVPVFEALRAWRAAQAKELGLPAYVIFHDATLREIATVRPATLGELGG
ISGLGEKKLATYGEGVLEVLAELPAAAEAEAEAATPAKAALPETAPPAEAPPAPATQTPA
APARVPAPAPSRAPARTPAPAPAPADDSEFGWDEEPPEWE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggatgtgaccacgggcggggccgccggggcgaccgagagcgaggcgcggcgg
accctgcaccgcgtcttcgggtacgaggcgttccgcggcgagcaggaagcggtcgtcgac
catgtggtggccggcggggacgccgtcgtgctcatgccgaccggtggcggcaagtccctc
tgctaccagatcccggccctggtcaggcggggcaccggcatcgtgatctccccgctgatc
gccctcatgcaggaccaggtggacgccctgcgcgcgctcggtgtgcgggccggcttcatc
aactccacgcaggacttcgacgagcgccgctcgatggaggcccagttcgtcgccggtgag
ctggacctgctctacctggccccggagcggctgcggctggacgccaccctggccctgctc
tcccggggcgaggtctccgtcttcgccattgacgaggcgcactgcgtcgcccagtggggc
cacgacttccgccccgactacctcgccctgtcggtgctcggcgagcgctggcccgacgtg
ccgcgcatcgccctgacggccaccgcgaccgacgccacgcaccgcgagatcacccagcgc
ctgggcatgcccgacgccaggcacttcgtggccagcttcgaccggcccaacatccagtac
cgcatcgtgggcaaggccgacccgaagaagcagctgctctccttcctcaaggaggagcac
gcaggggacgcgggcatcgtctactgcctctcccgcgcctccacggagaagaccgccgag
tacctctgccgcaacggcatcgaggccgtcccgtaccacgcggggctcgacgccgggacc
cgcgcggtccaccagtcccgcttcctgcgcgaggagggcctcgtcgtcgtcgcgacgatc
gccttcggcatgggcatcgacaagccggacgtccgcttcgtcgcccacctggacctgccg
aagtccgtcgagggctactaccaggagaccggccgtgcgggccgcgacggagccccgtcc
acggcctggatggcgtacggcctccaggacgtcgtccagcagcgcaagctcatccagggc
ggcgagggcgacgagtccttccgccgccgggccgcctcccacctggactccatgctggcc
ctgtgcgagaccgcccagtgccgccgcgcccagctcctcacctacttcggccaggacccc
accgccgcctcctgcggcaactgcgacacctgcctcaccccgcccgagacctgggacggc
acggtggtctcgcagaagctgctgtccacggtcgtacggctgaagcgggagcgcgggcag
aagttcggcgccggccagatcatcgacatcctgctcggccgccgcacggccaagatcatc
cagttcgaccacgaccagctctcggtcttcggcatcggcgacgagctggccgaggcggag
tggcgcggcgtcgtgcgccagctcctcgcccagggcctgctggccgtcgagggcgagtac
ggcacgctggtcctgaccgaggagagcggagccgtcctcggccgggagcgcgaggtgcag
ctgcgcaaggagccgaagaagccgacggcctcccgctcgtcgtcgcggggcgagcgcaag
ggcaaggcggccgtggccgccgacctccccgggacggccgtcccggtcttcgaggccctg
cgcgcctggcgcgccgcccaggccaaggagctgggcctcccggcgtatgtgatcttccac
gacgcgaccctgcgcgagatcgcgacggtccgcccggcgacgctcggcgagctgggcggg
atcagcggcctgggcgagaagaagctcgcgacgtacggggagggcgtgctggaggtgctg
gccgagctgccggccgcggcggaggcggaggcggaggccgcgaccccggcgaaggccgca
ctcccggagacggcacccccggcggaagcgcccccggcccccgcgacccagacccccgca
gccccggcccgcgtgcccgccccggcgccgtcccgcgcccccgccaggacgcccgctccg
gcccccgcccccgccgacgactccgagttcggctgggacgaggagccgccggagtgggag
tga
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