Streptomyces castrisilvae: P8A18_20680
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Entry
P8A18_20680 CDS
T10534
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
scat Streptomyces castrisilvae
Pathway
scat03020
RNA polymerase
Brite
Enzymes [BR:
scat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P8A18_20680
Transcription machinery [BR:
scat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P8A18_20680
DNA repair and recombination proteins [BR:
scat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P8A18_20680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WLQ35683
LinkDB
All DBs
Position
4749172..4753071
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDEERRTRDLPSLEAHVSVERQQIENRRDSDLENRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGCMGAAALQKRLESFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNKPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEAIMAFDAGELALQSSVDIRFPVGTIPPRGWVPPVAEEGEPEYQPGDTFRLR
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVKGYEEQDEKVQKQYERGLITKDERTQELINIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLKIAVKG
ADGVLRKTEDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISESAGRVRIEETEKTKKLVVTPDDGSDEIPFPISKRARL
LVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cggacctggtcccacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgctccc
gtcacccacatctggtacttcaagggtgtcccgtcgcgtctgggctacctgctggacctc
gcgccgaaggacctcgaaaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gaggagcgccgcacccgcgacctcccgtcgctggaggcgcacgtctccgtcgagcgccag
cagatcgagaaccgccgcgactcggacctcgagaaccgcgccaagaagcttgagaccgac
ctggccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgcctcgac
gaggtgtggagccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggctgcatgggcgccgccgcg
ctgcagaagcggctggagtccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttccttcagacgagtaacaagcccaagggcatggtgctcgactgcgtaccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgcctcaagcggcttctcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggtcccggtaaccgtcccctgaag
tccctcagcgacatgctgaagggcaagcaggggcgtttccgtcagaacctgctcggcaag
cgtgtggactactccgcgcgttccgtgatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaaggcgatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctgaaccacgcgcagaacatcaagtcggccaagcgcatggtcgagcgcggccgc
accgtggtgtacgacgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggtcgtcccgtcaccatgccgacccaggac
atggtgctgggcctgttcttcctgaccaccgacggcgagctccgtgacaccaagggcgag
ggccgtgcgttcggctccacggccgaggcgatcatggcgttcgacgccggcgagctggcg
ctccagtcgtccgtcgacatccgcttcccggtgggcaccatcccgccgcgtggctgggtg
ccgccggtcgccgaggagggcgagcccgagtaccagccgggcgacaccttccggctgcgg
acgagcctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcaacgctcgacaacctgaaggcggcgggcttccactgggcgacc
cgttcgggcgtcaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcaagggctacgaggagcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcaacatctggaccaaggcgaccaacgaggtt
gccgaggccatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcgtcagatcgccggtatgcgtggtctggtgtcc
aacgccaagaacgagacgattccgcgtcccatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgctgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatc
attcgcgaggaggactgcggcaccgaccgcggcctcaagctgaagatcgccgtcaagggc
gccgacggcgtgctccgcaagacggaggacgtcgagacctcggtctacgcccgcatgctc
gccgaggacgtcgtcgtggacggcaaggtcatcgcgcctgccaacgtcgacctcggtgac
gtcctgatcgacgccctggtgggcgccggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgagtcgtcgagctcttcgaagcccgtacgcccaagggtgtcgccccg
atctcggagtccgcgggccgggtccggatcgaggagaccgagaagaccaagaagctcgtg
gtcacgccggacgacggcagcgacgagatccccttcccgatctccaagcgtgcccgtctg
ctggtcggcgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctgcgcatcctcggtcagcgcgcggtccaggtccacctggtcggcgag
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctccgccgcgtgacgatcatcgagtccggcgacgcggaactgctgccg
ggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gagtcgtggctgtccgcggcctccttccaggagacgaccagggtcctgacggacgcggcg
atcaacgccaagtccgactccctgatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
acgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
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