KEGG   Streptomyces castrisilvae: P8A18_25120
Entry
P8A18_25120       CDS       T10534                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
scat  Streptomyces castrisilvae
Brite
KEGG Orthology (KO) [BR:scat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:scat03032]
    P8A18_25120
   03036 Chromosome and associated proteins [BR:scat03036]
    P8A18_25120
   03400 DNA repair and recombination proteins [BR:scat03400]
    P8A18_25120
DNA replication proteins [BR:scat03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    P8A18_25120
Chromosome and associated proteins [BR:scat03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    P8A18_25120
DNA repair and recombination proteins [BR:scat03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      P8A18_25120
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Mitofilin
Other DBs
NCBI-ProteinID: WLQ36503
LinkDB
Position
5749198..5749863
AA seq 221 aa
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSTRTTAK
AAAKKATAKKAVAKKATAKKATPAKKTTAAAKKTSAKKTSPAKKTTTAAKKATPAAAKST
AAKKTTAAKTAPAKKTTAKKAPAKKTTARKTTAKKATARKK
NT seq 666 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcggacgccgtcgacgcggtgctcgacgcgatcgtccgtgcggtcgtcgcgggggaccgg
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgccccgcccgctacgcccgc
aaccctcagacgggtgagcgcgtgcgggtcaagaagacctcggtgccccgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctccaagaagctccccaagaacgacgtggcc
gtgaagaaggcccccaagggcagcctctcgggcggttcttccacccgtacgacggccaag
gccgccgccaagaaggccaccgcgaagaaggccgtggcgaagaaggccaccgccaagaag
gcgaccccggcgaagaagaccacggccgccgccaagaagacgtcggcgaagaagacgtca
ccggcgaagaagacgacgacggccgcgaagaaggccacccccgcggcggcgaagtcgacg
gcggccaagaagaccaccgccgccaagaccgcgcccgccaagaagaccacggcgaagaag
gcgcccgcgaagaagaccaccgcgcgcaagaccacggccaagaaggccaccgcgcgcaag
aagtga

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