Streptomyces castrisilvae: P8A18_25435
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Entry
P8A18_25435 CDS
T10534
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
scat Streptomyces castrisilvae
Pathway
scat02020
Two-component system
scat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
P8A18_25435 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P8A18_25435 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scat03021
]
P8A18_25435 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scat02035
]
P8A18_25435 (whiG)
Transcription machinery [BR:
scat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P8A18_25435 (whiG)
Bacterial motility proteins [BR:
scat02035
]
Flagellar system
Flagellar assembly proteins
Stator
P8A18_25435 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WLQ36563
UniProt:
A0ABY9HPS7
LinkDB
All DBs
Position
5814678..5815514
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AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPPAARGTVRPPAPSSLDELWRSYKTTGDGRLREQLILHYSPLVKYVA
GRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIERAIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAQLRRTPSEAEVAAEMDVTLDELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPDREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADAGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgcgcggcagtaccaccggctgcgcgtggcact
gtgcgccctcccgccccgtcctcgctcgacgagttgtggcgttcgtacaagacgacgggc
gacggaaggctgcgggagcaactgatcctgcactactcgcccctggtgaagtacgtcgcc
ggccgggtgagtgtgggcctgccgtccaacgtcgagcaggcggacttcgtctcctccggg
gtcttcgggctgatcgacgcgatcgagaagttcgacatcgagcgggcgatcaagttcgag
acgtacgcgatcacccgcatccggggcgcgatgatcgacgaactccgggcgctggactgg
attccccgctccgtccggcagaaggcgcgcgccgtggagcgcgcctacgccaccctggag
gcccagctgcggcgcaccccgtcggaggcggaggtcgcggcggagatggacgtcacgctg
gatgaactgcacgcggttttcagccagttgtcgctggccaatgtggtggcgctggaggag
ctgctccatgtgggcggcgagggcggcgaccggctgagcctgatggacacgctggaggac
accgccgccgacaacccggtggaggtggccgaggaccgtgagctcaggaggctgctggcc
cgggcgatcaacacccttccggaccgcgagaagacggtcgtcacgctctactactacgag
ggcctgacccttgccgagatcggcaacgtgctcggggtgacggagagccgcgtcagtcag
atccacaccaagtcggtcctccagctccgcgcgaaactggccgacgccggccgctga
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