Streptomyces castrisilvae: P8A18_26135
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Entry
P8A18_26135 CDS
T10534
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scat Streptomyces castrisilvae
Pathway
scat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A18_26135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scat03019
]
P8A18_26135
03400 DNA repair and recombination proteins [BR:
scat03400
]
P8A18_26135
Enzymes [BR:
scat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8A18_26135
Messenger RNA biogenesis [BR:
scat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8A18_26135
DNA repair and recombination proteins [BR:
scat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8A18_26135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
DUF8096
PglZ_C
Motif
Other DBs
NCBI-ProteinID:
WLQ36693
UniProt:
A0ABY9HQ64
LinkDB
All DBs
Position
complement(5991865..5994036)
Genome browser
AA seq
723 aa
AA seq
DB search
MTNADRAELRASADSVLARLVGDTSGTARLREDQWRAIEALVADKRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVTAAARAGISARTINSSNTEEWDTIQAEVA
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPAGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLRLPNAAH
RLAWLGDHLKELPGSGIIYTLTVAAAEEVTAYLRQCGHTVASYTGRTENAERQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASVAFPPEEQVRRTIDALAQAGRPLSLPALEPLVDLRRTRLETMLKVLDVDG
AVRRVKGGWTATGEPWVYDAERYAWVARQRAAEQQAMRDYATTDGCRMEFLRRQLDDEEA
TACGRCDNCAGARFDEQVSDAALDTAKGELGRPGVEVEPRKMWPTGLASVGVDLKGRIPA
GELSGTGRALGRLSDIGWGNRLRPMLAAQAPDGPVPDDVAAAVVTVLADWARGPGGWAPD
AVDAVPRPVGVVTMASRRRPQLIESLGRHISEVGRMPLLGHVGHVPGTEDIRISQTNSAQ
RVRALHERLVVGPELAEALASAGGPVLLVDDLSDTGWTLAVASRLLRRAGAQAVFPLVLA
VQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcagaccgcgcagagctcagggcttcggccgattccgtactggcccgactc
gtaggtgacacctccggcaccgcccggctgcgtgaagaccagtggcgggccatcgaggca
ctcgtcgccgacaaacgccgagcgctggtagtccagcggaccggatggggcaagtccgcc
gtgtacttcgtcgcgacctcgctgctgcgcgccaggggcagcggcccgaccgtgatcgtc
tcgccgctgctggcactgatgcgcaaccaggtcacggcggcggccagggccggcatcagc
gcgcgcacgatcaactcgtccaacacggaggagtgggacaccattcaggccgaggtggcc
gccggtgaggtcgatgtgctgctggtcagcccggagcggctcaacaatcccgacttccgc
gaccaggtgctgccccggctggccgcggcgaccgggctgctcgtcgtcgacgaggcgcac
tgcatctccgactggggccacgacttccgtcccgactaccggcgtctgcgcacgatgctc
gccgatctccccgccggtgtcccggtcctcgcgaccaccgccacggcgaacgcccgcgtg
accgccgacgtggcagagcagttgggcaccggcgccggtaccgacgccctcgtcctgcgg
ggcccgctggatcgcgagagcctgagcctgggtgtgctgcgactgcccaacgccgcgcac
cggctggcgtggctcggtgaccatctcaaggaactcccgggctcgggaatcatctacacc
ctgacggtcgccgcggccgaagaggtcaccgcctacctccgccagtgcgggcacaccgtc
gcttcgtacaccggccgtacggagaacgccgaacggcagcaggcggaggacgatctgctg
gccaaccgggtcaaggcgctggtggcgacctccgcgctcggcatggggttcgacaagccg
gacctcggcttcgtcgtgcacctgggatcgccctcctcccccatcgcctactaccagcag
gtgggccgcgctggccgcggggtcgagcatgccgaggtgctgctcctgccgggcaaggag
gacgaagccatctggcagtacttcgcttcggtcgccttcccgccggaggagcaggtccgg
cgcaccatcgacgcgctcgcccaggccggccggccgctgtcgctgcccgccttggagccc
ctggtcgacctgaggcgtacacgtctggagaccatgctcaaggtgctcgacgtcgacggg
gcggtccggcgggtgaaggggggctggacagcgacgggtgagccctgggtctacgacgcc
gagcgctatgcctgggtggccaggcagcgggcggccgagcagcaggccatgcgcgactac
gcgacgacggacggctgccggatggagttcctgcgccgtcagctggacgacgaggaggcg
accgcgtgcgggcgctgcgacaactgtgccggcgcgcggttcgacgaacaggtctcggac
gccgctctggacaccgcgaagggtgagctcggcaggccgggtgtggaggtggagccgcgc
aagatgtggcccaccggtctcgcgtcggtcggtgtcgatctcaaggggcggattccggcg
ggggagctttccggcacgggccgggcgctcgggcggctctccgacatcggctggggcaac
cggctgcgtccgatgctggcggcgcaggcgcccgacggtcctgtgccggacgacgtggcc
gccgcggtggtgaccgtgctggccgactgggcccggggccccggcggctgggccccggat
gccgtcgacgcggtgccgcggccggtcggtgtggtcaccatggcctcgcggcgccggccg
cagctcatcgaatccctcggcagacacatctccgaggtggggcggatgccgttgctgggg
cacgtcggccatgttccgggcaccgaggacatccggatctcgcagaccaacagcgcccag
cgggtccgggccctgcacgagaggctggtcgtggggcccgagctcgccgaggccctcgcg
tcggcaggcgggcccgtgcttctcgtggacgatctgtcggacacgggctggacgctcgcg
gtggcgtccaggctgttgcggcgggccggagctcaagcggtgtttccgctggtcctcgcc
gttcaggcgtga
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