Streptomyces castrisilvae: P8A18_31545
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Entry
P8A18_31545 CDS
T10534
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scat Streptomyces castrisilvae
Pathway
scat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P8A18_31545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scat03400
]
P8A18_31545
Enzymes [BR:
scat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P8A18_31545
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P8A18_31545
DNA repair and recombination proteins [BR:
scat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P8A18_31545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
WLQ37695
LinkDB
All DBs
Position
7297733..7298593
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AA seq
286 aa
AA seq
DB search
MPELPEVEALRLFLDDHLVGREIDRVLPLAISVLKTYDPPLTALHGGTVTDVTRHGKFLD
IGVGPLHLITHLARAGWLRWKDGFPEAPPRPGKGPLALRTVLTGGDGFDLTEAGTTKRLA
VHLVRDPADVPGIARLGPDPLVPSFGRDAFAALLEGERRQIKGALRDQSLIAGIGNAYSD
EILHVAKMSPFKLTARLTDEEITRLYTALRTTLEDAVARSGGVEAGRLKAEKKSAMRVHG
RTGQACPVCGDTIREVSFSDSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaagtcgaagccctgcggctcttcctcgacgaccatctcgtcggc
agggagatcgaccgcgtcctcccgctcgccatcagcgtcctgaagacgtacgacccgccc
ctcaccgcgctgcacggcggcacggtcacggacgtgacgcggcacggcaagttcctcgac
atcggcgtcggcccgctgcacctgatcacccacctcgcccgggccggctggctccgctgg
aaggacggcttccccgaggccccgccccgccccggcaagggcccactcgccctgcgcacc
gtcctcaccggcggcgacggcttcgacctgaccgaggccggcaccaccaaacgcctcgcc
gtccacctcgtgcgcgaccccgccgatgtgcccggaatcgcccggctcgggcccgacccg
ctcgtgccctccttcggccgggacgcgttcgccgcactgctcgaaggggaacgccgccag
atcaagggcgccctgcgcgaccagtcgctcatcgccggcatcggcaacgcctacagcgac
gagatcctgcacgtcgcgaagatgtcgccgttcaagctcaccgcccgcctcaccgatgag
gagatcacccggctgtacacggccctgcgcaccacgctggaggatgccgtcgcccgctcc
ggcggggtggaggccggccgtctcaaggccgagaagaagagcgcgatgcgcgtccacggg
cgcaccggccaggcctgcccggtctgcggggacaccatccgcgaggtgtccttcagcgac
tcctcgctccagtactgcccgacctgccagaccggcgggaaacccctcgcggaccgccgc
ctgtccagactgctcaagtag
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