Scyliorhinus canicula (smaller spotted catshark): 119950587
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Entry
119950587 CDS
T11175
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
scau
Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scau03019
]
119950587 (tial1)
03041 Spliceosome [BR:
scau03041
]
119950587 (tial1)
Messenger RNA biogenesis [BR:
scau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119950587 (tial1)
Spliceosome [BR:
scau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119950587 (tial1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_Nup35
RBD_AKAP-17A
Calcipressin
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
119950587
NCBI-ProteinID:
XP_038629070
LinkDB
All DBs
Position
16:complement(29356666..29402401)
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AA seq
390 aa
AA seq
DB search
MEDDSYPRTLYVGNLSRDVTEALILQLFSQIGPCKSCKMITEQTASRRVNSSVGFSVLQH
SSNDPYCFVEFYEHRDAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTTNHFHVFVGDL
SPEITTEDLKSAFAPFGRISDARVVKDLATGKSKGYGFVSFYSKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKSAPESSSKHLKFEEVVNQSSSTNCTVYCGGIASGLTEQLMRQT
FSPFGQIMEIRVFPEKGYSFVRFATHDSAAHAIVSVNGTTIEGHIVKCYWGKETTDSANK
YQQMEFAQPWGQWGQWYGNAQQYGQYVANGWQVPSYGMYGQAWNQQGFGVDQPQSAAAWV
GGFSAQPAQGQGTAVIPNQAGFGMAGYQTQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgattcgtatccgcgcaccctctacgtaggtaacctctccagagatgtgact
gaagcccttatacttcaactttttagtcagattggcccatgcaaaagttgtaaaatgatt
accgagcaaaccgcaagcagaagggtgaactcttctgttggattttctgttttgcagcat
tccagcaatgatccgtattgctttgtggaattctacgagcatagggatgcagcagctgca
ttggctgcaatgaatggccgtaaaataatgggtaaggaagtcaaagtaaactgggcaaca
acaccaagtagccagaagaaagatacaaccaatcattttcatgtgtttgttggtgactta
agccctgagataaccactgaggatctaaaatctgcattcgcaccctttggtagaatatcg
gatgctcgtgttgtaaaagacttggcaacagggaaatctaaaggctatggatttgtatct
ttctacagtaaactggacgcagaaaatgcaattgtgcacatgggtggtcaatggctggga
ggccgacaaattcgaacaaactgggcaacgcgcaaaccgccagctccaaagagtgcacca
gagagtagttcgaaacatctaaaatttgaagaagttgtcaatcaatctagttccacaaat
tgtactgtctattgtggaggtattgcttcaggcctaacagagcagcttatgcgtcaaact
ttctctccatttgggcaaatcatggaaattcgagttttcccagaaaagggttactcattc
gttaggtttgcaacacatgatagtgctgctcatgctatagtgtcagttaatggaaccact
attgaaggccatattgttaaatgctattggggtaaagaaactactgattcggccaacaag
tatcagcagatggaatttgcccagccctggggtcagtggggccagtggtatggcaatgct
caacagtatggtcagtatgtagccaatggttggcaggtgccctcttacggcatgtatggc
caagcgtggaatcagcaaggatttggcgtagatcaacctcaatctgccgctgcctgggta
ggtggatttagtgctcagccagcccaagggcagggtacagctgttatacctaaccaagct
ggctttgggatggcaggttaccagacgcagtga
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