Scyliorhinus canicula (smaller spotted catshark): 119950815
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Entry
119950815 CDS
T11175
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scau03016
]
119950815
Transfer RNA biogenesis [BR:
scau03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
119950815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_17
TPR_14
TPR_19
TPR_12
TPR_1
TPR_11
TPR_8
TPR_CcmH_CycH
ARM_TT21_N
TPR_15
ANAPC3
TOM20_plant
TPR_MalT
ANAPC5
NatA_aux_su
Iml2-TPR_39
Tlp
Motif
Other DBs
NCBI-GeneID:
119950815
NCBI-ProteinID:
XP_038629565
LinkDB
All DBs
Position
16:complement(59517224..59558371)
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AA seq
491 aa
AA seq
DB search
MSNAQEDLLKVDLEQLQCHFTWAPQRENIDLDDMKQRLEDSIQTGVKYQERSYNHLAFIN
CLQRNCEEAIQNLKEAEKILRENHDDEFYTRIIITYGNYAWIYYHMEQLTEAQSYLDKLE
KICKQFPDASRYTAMIPEVYGEKGWSLLSSAAQYYEEAKECFKKALEEDPDNIEWNVGYA
TALSRLEDFSGTPENQGPSESVRQWRRVLELDPDDSVAMVQLALKLQFKHKNDEEGVKLV
EVALQKSPDQPYVLRYAARFYRFQRDVDKAVELLKKGLEITPHSAFLHHQIAQCYKTKLN
PLIKHPSSRDPHNPAFRQRKELIDQCKFHFQKAIGKRSLTSIKSHLDLAEIWAIDEEYRK
ANEIYKHLLTLEGIRPENKQAICLQAGLFELNHKNSESNAISHFLEGIKVNYDSIQWKRC
RENLEKIAGRRLRRNPRESKALGVFGFLHQLDGERCEAIKCFEKALEFDPGNEEYLSALC
ELRLSINDVPN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgcacaggaggatttgttgaaagtggatcttgaacagcttcaatgtcacttc
acgtgggctccacagagagaaaacattgacctggatgacatgaagcaaagattagaagat
tcaatccaaactggtgtgaaatatcaagagaggtcttacaaccatctcgcctttataaac
tgtctgcaaagaaactgtgaggaggcgattcaaaacttaaaggaagctgaaaagattctg
agggaaaatcatgacgatgaattttatacaagaatcatcatcacctatggaaactatgcc
tggatatattatcacatggaacaactgacagaggctcagtcctacctcgacaaactggag
aagatctgtaaacaatttcctgatgcctctcggtacacagcaatgatacctgaagtatac
ggggagaagggttggtctctgttgagttctgcagctcaatattatgaagaagcaaaggaa
tgttttaaaaaggctctggaggaagatccggataacattgaatggaatgtcgggtatgcg
actgccctgtctcgtctggaggatttttctggtactccagagaatcaagggcccagtgaa
tcagtgaggcagtggagacgtgtgctggagcttgatccagatgactctgtagccatggta
cagttagctctaaaactacagttcaaacataagaatgacgaggaaggagttaaattagtt
gaagttgcgttgcagaagtcccctgaccagccatatgtgcttcgttacgcagcaagattt
tacagatttcaaagagatgtggataaagctgtggagctgttgaagaaaggattggaaatt
accccacactctgccttcttacaccatcaaatagctcagtgttacaaaaccaaactgaat
ccattgatcaaacatccaagtagcagagatccccacaatcctgcttttcggcaacgaaaa
gaattgatcgatcaatgcaagtttcattttcaaaaagcaatagggaagcgatccctaaca
tcaatcaagtcacacctggatttggcagaaatctgggcaatagatgaagaatatcgcaaa
gcaaatgagatttacaaacatctcctgacattggaaggtatacgtccagagaataagcag
gcaatatgtttgcaggctgggttatttgaactaaatcacaagaactcagaatcaaatgcc
atcagccattttctggaaggaatcaaagtcaattatgattcaatacaatggaaaagatgt
cgagaaaacttggagaagatagcaggaagacggcttcgcaggaatcctagggaaagcaag
gcccttggtgtttttgggttcctgcaccagctggatggtgagagatgtgaagctattaaa
tgctttgaaaaggccttggagttcgatcctggcaatgaagaatatctcagtgctctttgt
gaattacgtctttccatcaatgacgttcccaattaa
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