Scyliorhinus canicula (smaller spotted catshark): 119950832
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Entry
119950832 CDS
T11175
Symbol
ebf3a
Name
(RefSeq) transcription factor COE3a isoform X1
KO
K09103
early B-cell factor
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scau03000
]
119950832 (ebf3a)
Transcription factors [BR:
scau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
119950832 (ebf3a)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
119950832
NCBI-ProteinID:
XP_038629590
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Position
16:complement(44207083..44352709)
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AA seq
596 aa
AA seq
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MFGIQENIPRGGTTMKEEPLGSGMNPVRSWLHTAGVVDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAYVDFVEKDKEPNNEKTNNGIHYKLQLLYSNGV
RTEQDLFVRLIDSMTKQPIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTAPSYLEYATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPTLGNTPAHSGMMGVNSFSSQLAVNVSESSQGNDQVGYSRNTSSVSPRGYVPSSTPQQ
SNYNTVSNSMNGYGNAAMTNLGVPGSPGFLNGSSANSPYGIVPSSPTMAASSVTLPSNCS
STHGIFSFSPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaattcaggaaaatataccgagaggtgggacgaccatgaaagaggaaccgcta
ggaagtgggatgaatccggtccgatcgtggttgcacactgctggggtagtggatgctaac
acggccgcccagagcggcgtgggtctggctcgggcacattttgaaaagcagccgccctca
aacctcagaaaatccaattttttccacttcgtcctggccctttacgacaggcaagggcag
ccggtcgagatcgagagaacagcttatgtggactttgtggagaaggacaaagagccaaat
aatgagaaaaccaacaatggaatacactacaaacttcagttactgtacagcaatggggtg
cggacagaacaggatctctttgtcaggctcatcgattcaatgaccaaacagccgataata
tacgaagggcaagacaaaaaccccgaaatgtgcagagtcctactgacacacgaaataatg
tgcagccggtgttgtgacaaaaaaagttgcggcaacagaaatgaaactccctcagacccc
gtcattattgacagattcttcttaaagtttttcctcaagtgcaatcagaactgtttgaag
aatgcaggaaatccacgggacatgcgtagattccaggttgttatatcgacaacagttaat
gttgatggccatgtactggctgtctcagacaacatgtttgtacacaacaactccaagcat
ggaaggcgggctcgccgccttgacccttcagaaggtacggccccttcttatctggaatat
gctactccatgcataaaagctatcagccctagtgaaggttggaccactggtggagccacg
gtcatcataataggagacaacttttttgatggtttgcaagttgtattcggcactatgctg
gtttggagtgagctgataactccccacgccatcagagttcaaaccccacctcggcacatt
cctggagtggtagaagtcaccctgtcttacaagtcaaaacaattctgcaaaggtgctcct
ggacgatttgtctacactgctttaaatgagccaaccatagattatggattccagcggttg
cagaaagtcattcccaggcatccaggtgatcctgaaaggttaccaaaggaagtattactg
aagagagcagctgatttagtagaagccctatatggaatgccacacaacaaccaggagata
attctcaaacgagcagctgatattgctgaagctttgtacagtgtgccacgtaatcacaac
cagctccctacactcggcaacaccccagctcacagtggtatgatgggagtgaattctttc
agcagccagctagcagtcaatgtgtcagagtcatcacagggtaatgaccaagtagggtac
agccgtaacacaagtagcgtctccccgcgtggatatgttcccagcagcacccctcagcaa
tccaactataacacagtcagcaacagcatgaacggatatggcaatgctgcaatgaccaac
ctgggggtacctggctctcctggatttttgaacggttcatcagccaactctccctatggc
atagtgccgtcaagccctaccatggcagcctcttcggtcacccttccttcaaactgtagc
agtacacacggcattttctcattctcacctgccaatgtcatctctgcagtgaaacaaaag
agtgcatttgctcctgttgtcaggcctcaagcctctcctccaccatcttgcaccagtgca
aatggaaatggacttcaagctatgtctggacttgtagtcccaccaatgtaa
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