Scyliorhinus canicula (smaller spotted catshark): 119951072
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Entry
119951072 CDS
T11175
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04110
Cell cycle
scau04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119951072 (smc3)
04114 Oocyte meiosis
119951072 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scau03036
]
119951072 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
scau00535
]
119951072 (smc3)
Chromosome and associated proteins [BR:
scau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119951072 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
119951072 (smc3)
Proteoglycans [BR:
scau00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119951072 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
CreS_N
Motif
Other DBs
NCBI-GeneID:
119951072
NCBI-ProteinID:
XP_038630036
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Position
16:17165342..17245273
Genome browser
AA seq
1089 aa
AA seq
DB search
MNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESINLMKE
TEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDE
LSAKRETSGEKSRQLRDAQQEARDKMEDIERLARELKAKILSMKEEKEQLSSERQEQIKQ
RTKLELKAKDLQDEMAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFSAVKEKEENG
IARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAITKDLE
DTEANKERNLEQYSKLDQDLAEVKARVEDLDKKYYEVKNRKDELQSERNYLWREENAEQQ
ALAAKREELEKKQQLLRGATGKAILNGIDSINKVLEHFGRKGINTHVISGYHGIVMNNFE
CDPAFYTCVEVTAGNRLFYHIVESDEVSTKILMEFNKQNFPGEVTFLPLNKLDVRDTAYP
ETNDAIPMISKLRYIQRFDKAYKHVFGKTLICRSMEVSTQLARAFNMDCITLEGDQVSHR
GALTGGYYDTRKSRLELQKDARKAEEELTELEAKLNENLRRNIEKINNEIDQLMNQMQQI
ETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAEL
GTDLLSQLSLDDQKRVDALNDEIRQLQQDNRQLLNERIKLEGIMTRLETYLSENLRKRLD
QVEQELNELRETEGNTVLNATTSELENINKRVRETTARAEELDSLIDKIEGETKDRQKSM
DRWKNMEKDHMEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLS
LKQLFRKLEQCNQELKKYSHVNKKALDQFVNFSEQKEKLMKRQEELDRGHKSIMELMNVL
ELRKYEAIQLTFKQVSKNFSEVFTKLVPGGKASLVMKKGDVEGSQSQDEGEGSASQSSVP
SVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQA
LDAQHRKAVSDMISELSAHAQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEQAKD
FVEDDTTHG
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttggaaagtgctgggttttccagaagcaatccatactacattgtcaagcaa
ggaaagattaatcaaatggcaacagctccagattcgcagcgactaaaacttttgcgagaa
gttgctggtaccagagtatatgatgaacgtaaagaggagagtatcaatcttatgaaggaa
accgaggggaagagagaaaagattaatgaattgttgaaatatattgaggagcgtctgcat
acactggaagatgaaaaagaagagttggcgcagtatcagaaatgggataagatgagaaga
gcacttgaatatactatctacaatcaggaactgaatgagactcgcgccaaacttgatgag
ctttctgcaaaacgagagaccagtggagagaagtcacggcaactgcgtgatgcacagcaa
gaagccagagataaaatggaggatatagagcgactggcacgtgaactgaaagcaaaaatc
ttatccatgaaggaagagaaagaacagctaagttctgaacggcaggagcagattaaacaa
aggactaaacttgagttgaaagcaaaggacctacaggatgaaatggctggaaacagtgaa
caaagaaaacgtcttttgaaggaaaggcagaaactattagaaaagatagaagagaagcaa
aaagaacttgcagaaacagaaccaaaattcagtgctgtcaaagaaaaagaagaaaatggg
atagcaaggttggcacaggccacccaggaaagaacagatttgtatgctaagcagggtcga
ggcagtcagtttacgtcaaaagaggagagggataaatggatcaagaaagagctgaagtca
ctcgatcaagctatcaatgataaaaaacgacaaattgctgcaattaccaaggacctggag
gatactgaagccaataaagagagaaatttggagcagtacagtaaacttgatcaggatctg
gctgaagtaaaagcacgagttgaggatcttgacaagaagtactatgaagtgaaaaacagg
aaggatgagctgcaaagtgaaaggaattacttgtggcgggaggaaaatgctgagcaacaa
gcattggcagcaaagcgagaagagttggaaaagaaacaacagcttcttcgaggtgcgaca
ggaaaggctattttgaatggtattgatagtattaacaaagtcttggagcattttggtcgt
aagggcatcaacacacatgtcataagtggatatcatggaattgtaatgaataactttgag
tgtgatccggctttttacacctgtgtggaagtcactgctggaaaccgactgttctatcac
attgtggaatctgatgaagttagtacaaagattttgatggaatttaataaacaaaacttt
cctggcgaagtcactttccttccactcaacaaactggatgtgcgagacaccgcttatccg
gaaaccaatgatgcaattcccatgataagtaaactccgatacatacagagatttgataaa
gcttataaacatgtgtttggaaaaacactgatatgtcgtagcatggaggtatctactcag
cttgccagagcatttaatatggattgcataactttggaaggtgaccaggttagtcatcga
ggtgccttaactggtggctattatgatactcgaaaatcaagacttgagcttcagaaggat
gcacgaaaagcagaggaagaattaactgaactggaagcaaagctgaatgaaaatctccgg
agaaacattgaaaagattaataatgagatcgatcaattgatgaaccaaatgcagcagatt
gaaacacagcagagaaaatttaaggcatcacgagacagcattctgtcagaaatgaagatg
ttgaaagagaagaggcagcagtctgagaaaaccttcatgcctaagcaacggagtttgcaa
agtttggaggccagtttgcacgctatggagtcaacacgggaatccttaaaagctgagctt
ggtacagacctgctttcacagctcagtctggatgatcaaaagagagttgatgcactcaac
gacgaaatcagacaactccaacaggataaccgacagctattaaatgaacgaattaagttg
gaaggtataatgaccagactggagacttacctcagtgaaaatttaagaaagcgcttggac
caggttgagcaggagttaaatgagctgagagaaaccgagggcaacactgttctaaatgcc
acaacttctgaactagagaacattaataagcgagtgagagagaccactgcacgtgccgaa
gaactggacagtttgatagacaaaatagaaggagaaaccaaagatcgtcagaaaagcatg
gaccgctggaaaaacatggagaaagatcacatggaagccatcaatcatgacaccaaggag
ctggagaagatgacaaaccggcagggtatgctgcttaagaaaaaggaggaatgcatgaag
aaaatcagagaattgggctcattgccacaagaggcctttgaaaaataccaaacactgagt
ctcaaacagctgtttcgcaagttggaacagtgtaatcaggagttgaagaagtacagccac
gtcaacaagaaagccttggaccagtttgtgaatttctcggaacagaaggaaaaacttatg
aaacggcaagaggagcttgaccgtggccacaaatccatcatggaacttatgaacgtactg
gagttgagaaagtatgaagccatacagcttaccttcaaacaggtgtctaagaatttcagt
gaggtattcaccaagttggtgccgggtggtaaagcatcactggttatgaagaaaggcgat
gtggaaggaagccagtcacaggatgagggtgaaggtagcgcatctcagagcagtgttccg
tctgttgaccaattcacaggagttggaattcgggtatcttttacagggaagcaaggagaa
atgagagaaatgcagcagctttctgggggtcagaaatctctagtggcactggctttaatc
tttgccattcagaaatgtgaccctgctcccttttacctctttgatgaaattgaccaggcg
ctggatgctcagcacagaaaagctgtttcagatatgatttctgaactctctgcacacgcc
cagttcattaccactacattcaggccagaattgcttgaatcagcagacaagttttatgga
gtgaaattcaggaacaaggtcagtcacattgacgtgatcacagctgaacaagctaaagat
tttgtggaagatgatactacacatggataa
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