Scyliorhinus canicula (smaller spotted catshark): 119951242
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Entry
119951242 CDS
T11175
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
scau04990
]
119951242
Domain-containing proteins not elsewhere classified [BR:
scau04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119951242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
FXa_inhibition
hEGF
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
119951242
NCBI-ProteinID:
XP_038630226
LinkDB
All DBs
Position
2:complement(17014004..17691787)
Genome browser
AA seq
1976 aa
AA seq
DB search
MQCSRFRICFPVLVILGSFVVLSESQRSFRGSSAHIAALRTGQAVSNLTASRARMAALST
TLGGRRSQDRNTASTRAPADPNAPVLSRTQSQISPGHSGALAARESSTALTRVNGQNLAG
ASPAATHRPSDSPVRSRTVNPASAKISRPIASRISAASSRESSRKLHGTAQDNSRTPARQ
SYAASSTVNRGFHSNVGGRSLSPQEKNPASTQGSKLSPVRASLLASGSLRTRLTASTSQL
RNRQIARQTPGRRAPSRRLIGANVCGRQCCSGWTVSPGTNRCIKPVCDPPCQNRGSCSRP
QLCVCRSGFQGSRCEEIVPEQPYIPRAFSSRSFSSRSSALHSNIFPRIESNAKNNTKITS
EASARHKASPVGQSFVTQHRQGQHGSTQQSSGTSRTVKHLSNGNGQLLSNALFNGNGQTS
VQNHYRANGQVLAENKNALPRGGNLTTSIGTIKIVFTPTICKRQCINGKCYNNCKKGDPT
TLYSENGYGPVSKSGFRIYFCQIPCLNGGYCIGRDKCRCPSNSTGKFCHLPVPPEKQTVS
KTVPVRSSDSQSVYTLPLSNQQVLMLPSLVNIHVNHPPEATVQIHQVARVKNAPDASTTN
SIKISQGQQSAHSVQQRSQLNADGNINEQPQPQHRPMNVGRCFQETADGQCGKPLPGLTK
QDDCCGSVGISWGYHKCTKCPPKPEHPKIHNGQVECPLGYKKMNQTNCKDINECLMSGMC
KNANCLNTRGSYRCTCKPGYMLDTSRSHCISDKAVSVEKGTCFRSLSRRNCSLPLSQQIT
KQICCCSRVGKGWGRNCEKCPLPGSVVFNEICPAGHGYHYSRSHIQISVRPAEEHELAQI
TSEQYLDSQQSTIKDSDLTSKEKNEDVRLEGYDTTIKAPQQPQPFAPAHVPRVDAYPVEV
VVKTSPPTLVHVVPESTARQVASVFATEISVINVCDVSPNICGPGLCINQQVGYLCKCDS
GYQLDNQQTKCVDTDECREVPQLCSYGQCENTVGGYRCICSTGFVLNQQGTDCIDINECE
LEPCEGKGHCINTVGTYSCSCFSGYTLVSLEDKQSCQDINECAQANLCRRGHCTNTPGSY
RCDCEVGYMMTRSGQCNDIDECRSPNTCPTGECINTMGSFQCVSCSTGYRAINGKCLDEN
ECLSFAVCANGNCINMDGSYKCICNQGFEPVTDLKSCRDIDECVSPDVCFNGLCTNTEGS
YTCSSCNSGYRVSEDRDKCEDMNECLSKGICGPNGECTNIEGSYFCICARGFENTPDGTG
CQDINECLARDICGPNGECINNEAGSYYCLCAQGYTTTADGTGCEDVNECSEEAKCSGGQ
CINTDGSYMCRCETGFTHLPEAEQCIDIDECSLYGSSVCGTWKCENTVGSYQCIVGCQPG
FQRTAIGECIDIDECINGTICGTHGYCENTDGSFRCHCDQGFEVPPRGQGCVDIDECAMM
NGVCGTALCENFEGSFFCECMDENEDFDPARGQCRPRIAMEETPGVSIVPELPRMSAPAK
GDLKECYYNLNDENFCDNLLSRNITKEECCCTVGVGWGDNCEVHPCPIINTDEYNEICPD
GKGFIPFQIGSFSFGSQNYGDADECAMFGSEICKNGHCVNNIGDYACYCGTGFYYDNVRL
ECVDIDECQDENTCVNGECVNTPGAFNCFCSPPLTLDVTRKRCINGTESGVDSEEVDTYL
DVCWQGVTEDDICSKPLRTRSTTYTECCCLYGEAWGLQCAFCPSRTSDDFAQLCNIPRIF
GDVSTGLHDRPGYEYGPETPSYGQDFQLGIGSDDNYLQPEYRPYDSQRELEYGPVNPYLG
PRFESRDPQPGSVYELRDPHLTPQYGLTDPRFGEGYGSRNPQPGPEYGSRGDSRTPQYSP
RQPGRVPLFSSSDNDRSSSFEGLQAEECGILNGCENGRCVRVEEGYTCDCFDGFELDMTK
MTCVDINECEDLSDSILCRNASCENTEGSYKCNCLPGYMFSQYPNDCVPETEARQH
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcagccgcttcaggatctgcttccctgtgctggtgattttggggagctttgtt
gtcctgagtgagtctcagaggagttttagaggtagttctgcccacattgcagctctcaga
actggacaggcggtctccaacctgacagcgagcagggccaggatggcagccctcagtacc
acactgggcggccggaggagccaggatagaaataccgcatcaacccgggcgccagccgac
ccgaacgcccctgtgttatcccgcacacagagccaaatttcacctggccacagcggagct
ctcgctgcccgagaaagtagcaccgctctcacacgggtaaacggacagaatttagccggg
gccagtccagcggcaactcaccggccaagcgattcccccgtccgatccaggacagtcaac
cctgcctcagccaagataagccgccccatcgcatcccgcattagcgcggcatcgtcccgg
gagagcagccggaaactacacgggacagcccaggacaacagccggaccccggcaaggcag
agttacgccgcttcgtccacagtgaaccgtggttttcattccaacgtcggcggcaggtct
ctttcgccccaggagaagaatccagcttccacccagggcagcaaactctcacctgtccgg
gctagcttgttggcttcaggttctttgaggacccggctaacggcaagtacttcccagctg
agaaacaggcagattgccagacaaaccccagggagacgagcaccgagcaggagactgata
ggagctaatgtttgtggaagacagtgctgttctggatggactgtgagccctggtacaaac
agatgtataaaacctgtgtgtgatccaccatgccaaaacagaggctcttgttcacgacct
cagctctgtgtctgccggtcagggttccagggttctaggtgtgaagaaattgttccagaa
caaccatacattccccgtgctttctcatcaagatctttctcatctcgatcatctgctttg
cattcaaatatattcccgaggattgaaagcaatgcaaaaaacaatacaaaaattacgagt
gaagcttcagctagacataaggcttcaccagtaggtcaaagttttgttacacagcataga
caaggacagcatggtagtactcagcaatcatcaggaacatcacgcactgtgaaacacctg
tcaaatggaaatggacagttactctccaatgcgttattcaatggcaatgggcagacatca
gttcagaaccattatagggcaaatggacaagtgttggcagaaaataaaaatgcactgcca
cgaggaggaaatctgaccaccagtataggaacaataaaaattgtcttcacaccaactatt
tgcaaacgccagtgtataaatggaaagtgttacaacaattgtaagaaaggtgacccaacc
accctttacagcgaaaatggttatggtcctgtgtccaaatcaggttttcgaatctatttt
tgccagatcccctgcctgaatggaggatactgcattggaagagacaagtgtcgatgccca
tcaaactcaacagggaagttctgccaccttccggtacctcctgaaaaacagactgtgtca
aagacagtacctgtcaggtcttctgattcacagtctgtatacactctccctctttccaac
cagcaagttcttatgctcccatccctggttaatatccatgtaaaccacccaccagaggcc
acagtacagattcatcaagtggcaagagtaaagaatgcacctgacgcctcaaccacgaac
agcataaaaatttctcagggccaacagtcagcccattcagtccagcaaagatcacagctt
aatgctgatggaaacatcaatgagcagccacagccacagcataggcctatgaatgttgga
agatgcttccaagaaacagctgatggccagtgtggaaaaccacttccaggtctcacaaaa
caggatgattgttgtgggagtgtcggaatatcgtggggataccataaatgcacaaaatgt
cctccaaaaccagaacatcccaagatacataatggccaggttgaatgtcctctgggctat
aaaaaaatgaaccagacaaactgtaaagatatcaatgaatgcctgatgtcaggaatgtgt
aaaaatgcgaactgtttgaacaccagaggtagctacagatgtacctgtaaacctgggtat
atgttggatacatcgaggagccactgcatctctgacaaggctgtttcagtagaaaaagga
acttgtttcagatcattatccagaagaaactgctctttgcctctttctcagcaaatcaca
aaacagatctgctgctgtagccgtgtgggcaaaggatggggtagaaactgtgagaagtgt
ccacttcctggctcagttgtgttcaatgaaatctgcccagcgggtcatggctatcattac
tccaggtctcacatccagatctcagtgagacctgctgaagaacatgaattagctcagatt
acctccgaacaatatcttgacagtcagcagagcaccatcaaggattctgatttaacctca
aaggaaaagaatgaggatgtaagattagaaggatatgataccacaataaaagctcctcaa
cagcctcagccctttgcacctgctcatgtcccaagagttgatgcatatccagtggaagtc
gtagtgaagacaagcccacctacattggtgcacgttgttcctgaatctacagctagacag
gtggcttctgtatttgcaacagaaatttcagttataaatgtatgtgacgtttcaccaaac
atttgtggtccaggactttgcatcaaccaacaagtcggatacttgtgtaaatgtgactct
ggttatcagctggataatcagcaaacaaagtgtgttgataccgatgaatgcagagaagtc
ccacagctttgtagctatggacaatgtgaaaatacagtgggaggttatcgatgtatttgt
tcaactggctttgtgctgaatcagcaaggcactgactgcatagatataaatgaatgtgaa
ctggagccatgtgaaggaaagggccattgcattaatacagtgggcacatattcctgttcc
tgcttttctggctacacgttagtcagtttagaagacaaacaaagttgccaagatataaat
gagtgtgcgcaggctaatttgtgccgtagagggcattgcacaaacaccccaggttcttat
cgctgtgactgtgaagtaggttacatgatgactagatcaggacaatgcaatgatattgat
gaatgtcgcagccctaatacatgccctactggagaatgcatcaataccatgggctccttt
caatgtgtcagctgttcaactggttacagagcaataaatggaaaatgcctagatgagaat
gagtgcttatcttttgccgtttgtgccaatggaaattgtatcaatatggatggatcctac
aaatgcatttgtaaccaaggttttgaacctgtgacagacctaaagagctgcagagacatt
gacgaatgtgtttcgcctgatgtttgttttaatgggctttgtacaaatactgagggatct
tacacatgttcatcctgcaattctggatacagagtatcagaagacagagacaaatgcgaa
gatatgaatgaatgcttgagcaagggcatctgtggcccaaatggagaatgtacgaacatt
gaaggatcctatttctgcatttgtgccagaggttttgaaaacactcctgacggtacaggc
tgtcaagatattaatgaatgcttggccagagacatctgtggtccgaatggagaatgcata
aacaatgaagcaggctcttattactgtctttgtgctcagggctataccactactgctgat
ggaacaggctgtgaagatgtgaatgaatgcagtgaggaggctaagtgttcagggggccaa
tgtataaatacagatggatcctatatgtgccgatgtgaaacaggtttcacacatttacct
gaagctgagcagtgtatagatattgatgaatgcagtttatatggcagctcagtgtgtggg
acctggaagtgtgagaatacagttggctcttatcagtgtattgtaggatgccagcctggt
ttccaacggacagctattggagaatgcattgacattgatgagtgtataaatggaacaatc
tgcggtactcatggatattgtgaaaatacagatggttccttccgctgccattgtgatcaa
ggttttgaggttccaccaagaggacaaggatgtgtggatattgatgaatgtgcgatgatg
aatggagtttgtggaacagcactctgcgaaaactttgaaggttccttcttctgtgagtgt
atggatgaaaatgaagactttgatccagcaagaggccaatgccgccctcgtatagccatg
gaggaaacaccaggagtgtcaatagtgccagagttgcccaggatgtcagcacctgcaaag
ggagatttgaaggaatgctactacaatctgaatgatgaaaacttctgcgataatttgcta
tcccggaacatcacaaaagaggaatgttgctgtactgttggagttggttggggtgacaat
tgtgaagttcacccctgtcccataatcaacacagatgaatataatgaaatttgtcccgat
ggcaaaggatttattccatttcagattggttcttttagctttggatcacagaattatgga
gatgcagatgaatgtgcaatgtttggatcggaaatttgcaagaatgggcactgtgtaaat
aacataggtgactatgcctgttattgtggcacaggattttactatgacaatgtgagactg
gaatgcgtagatattgatgagtgtcaggatgaaaatacttgcgtgaatggagagtgtgtc
aatacaccaggagcttttaattgtttctgcagcccaccacttacactggatgtaacacgc
aaaagatgtataaatggcacagaatcaggggttgactctgaagaggtagacacatatctg
gatgtatgctggcaaggtgtgactgaggacgacatctgtagcaaacctttgaggaccaga
tcaacaacatacactgaatgctgttgcttatatggagaggcctggggcttgcagtgtgcc
ttctgtccctccagaacatcagatgattttgcacagctttgtaacattcctaggatattt
ggtgatgtatcaactgggctccatgatagacctggctatgaatacggcccagaaacacca
tcctatggtcaagatttccaacttggaattggatccgatgacaattatcttcagcctgaa
tatagaccctatgattctcaacgtgaactagaatatggaccagtgaatccctatcttgga
ccaagatttgaatcgagagatccacaacctggctcagtgtatgaactgagagatcctcat
cttactcctcaatatggtttgacagacccccggtttggtgaaggatatggatcaaggaat
ccacaacctgggcctgagtatggctctagaggagattcacgcactccacagtacagccct
cgacagccagggagagtcccattatttagtagcagtgacaacgatcggtccagtagtttt
gaaggcttacaagcagaagagtgtggaattctgaatggctgtgaaaatgggcgatgtgtt
cgagtggaagaaggatacacatgtgattgttttgatggatttgagcttgatatgacaaaa
atgacttgtgtagatattaatgaatgtgaagatttgagtgacagcatactctgcagaaat
gcaagctgtgagaacacagagggatcatataagtgcaactgtttaccaggctatatgttt
tcccaatatcctaatgactgtgtaccggaaacagaagcaagacagcactaa
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