Scyliorhinus canicula (smaller spotted catshark): 119951397
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Entry
119951397 CDS
T11175
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119951397 (rlim)
Enzymes [BR:
scau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119951397 (rlim)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119951397 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING-like
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
119951397
NCBI-ProteinID:
XP_038630468
LinkDB
All DBs
Position
17:complement(24981362..25048931)
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AA seq
661 aa
AA seq
DB search
MENAANEDGGNEQADTQSSTEDQRRRQSDRLDREEAFYHFVNNLSEEEYRLMRDNNLFGT
PGEITEEELIRRLQQVKDGVIQNNPDARRSEGSGDNRGADGSEEGSSGDSLLEWLNAFRQ
TGNTTRSGQSGNRSWRAVSRTNPTSGDFRFSLEINVSRSRIDQSAEMESEQPMDTSNVAV
TVPAAEEAVTAVPSGNVNTPPPTAAQPPHAVTAPPMTVAVENVQSEPERPESTVTRRNRG
PSGELSYENRYELLRRELETQAHQGRPRSGRSRSPERRRSSRTRSNRSRSPLHRVGEGTS
RSRRQGSSQRPDRSISESGTEGSSRTRQHVVSRPSRAGDEVQAEVTNLVPAPEPSESREP
SQEAADSSDAVVSDPSVAGRRPPTIMLDLQVRRVRPGENADRDSIANRTRSRSQTSDNTV
VYESERGGLRRTFSRSERAGVRTYVSTIRIPFRRISDSGLGEAASVALQTILRRIMMGGE
LSSFVDSDSDSESSNRGQNQAQDASELQNSTSEPPSMAAEGRTSEQQAGEQRNGTETDNI
TGARRREGQQNRGLFGLEESGTLPILRLAHFFLLNDEDEDDQPRGLTKEQIDNLSTRNFG
ESDGIKTCSVCISEYTAGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRQAVLARTTESV
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgctgctaatgaagatggaggaaatgagcaggctgacactcagtcttctact
gaagatcagcgcaggcgccagtcagaccgcctggatcgcgaggaagccttctatcatttt
gtcaataacctgagtgaagaggaatacaggctgatgagggataataacctgtttggtaca
ccaggggaaattacggaagaggaacttatcaggcgtctacagcaggtgaaggacggtgtc
attcagaacaaccctgatgctcgaagaagtgaaggttctggtgacaaccgaggtgctgat
ggttcagaggaaggatcaagtggagattctcttctagagtggctgaatgcttttagacag
acagggaacacaacacgaagtggacaaagtgggaatcgatcatggagagcagtcagtcgt
acaaacccaacaagtggtgattttagattcagcttggaaattaacgtcagtcggagtaga
attgatcaaagtgccgagatggaaagtgagcaacccatggacacttcaaatgtggcagta
acagtgccagcagcagaggaagcagtgacagcagtgccatcaggaaatgtaaacacaccc
ccaccaacagcagcacaaccaccacatgctgtaacagctccaccaatgactgtagcagta
gaaaatgtccagagtgaacccgagcggcctgaatccactgtaacaaggcgaaatagagga
ccaagtggggaattatcctatgaaaacagatatgaacttttgagacgagagcttgaaact
caggcccatcaaggtcgcccaagaagtggtagaagtagaagccctgaacgccgaaggtct
tctagaacaagaagcaatagaagtcggtcaccgttgcatcgggttggtgaggggacgagt
agatcacgacgtcaggggtcttcccagaggcctgatagatccatttcagaaagtggaaca
gaaggcagttccagaactagacagcatgtggtgtccagaccgagtcgggctggagacgag
gtgcaggctgaagtaactaaccttgttcctgcacctgagccaagtgaatccagagagcct
tcccaggaagctgctgattcttcagatgctgtcgtcagtgatccctctgtagctggccgg
cgaccacctaccattatgttagatctgcaagtgagaagggtgagacctggtgaaaatgca
gatagagatagtatagccaacaggacccggtcacgatcccaaacgtctgacaacacagtt
gtgtacgaaagtgagcgtggtgggctcaggcgcacattctcccgctctgagcgagcaggg
gtgcgaacttacgttagcaccattcgtattccttttcgcaggatttctgattcgggtctt
ggggaggccgcctcggttgccctccaaacaatactacgccggataatgatgggaggggaa
ctgagttcctttgtggacagtgacagcgattctgaatctagcaacaggggccaaaatcaa
gcgcaagatgcttctgaattgcagaacagcacaagtgaacccccaagcatggctgctgaa
ggcagaacaagtgagcaacaggcaggagaacagcgaaatggcaccgaaacagataacata
actggtgctaggagaagagaaggtcagcaaaatcgaggcttatttggccttgaagaaagt
ggtactttgcccatacttaggcttgcccatttcttcctgctaaatgacgaagacgaggac
gatcagcccaggggactgactaaagagcagattgacaacttgtccacaagaaattttggg
gaaagtgatggaattaaaacctgcagtgtctgcattagtgagtacactgcaggaaacaag
ctgcgcaagcttccctgctctcatgagtatcatgttcactgtatcgaccgctggctgtct
gaaaactccacatgtcccatatgccgtcaggctgttttagctcgcaccactgaaagtgtt
ggctag
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