Scyliorhinus canicula (smaller spotted catshark): 119951622
Help
Entry
119951622 CDS
T11175
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04217
Necroptosis
scau04622
RIG-I-like receptor signaling pathway
scau04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119951622
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119951622
04625 C-type lectin receptor signaling pathway
119951622
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119951622
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119951622
Enzymes [BR:
scau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119951622
Peptidases and inhibitors [BR:
scau01002
]
Cysteine peptidases
Family C67
119951622
Ubiquitin system [BR:
scau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119951622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
119951622
NCBI-ProteinID:
XP_038630731
LinkDB
All DBs
Position
17:complement(129038259..>129102509)
Genome browser
AA seq
766 aa
AA seq
DB search
GGWSDRPSSFWRGVSDPEKRLALSANGPWLAWAGGLTPGTRVRVRMSSSSEEWAQGVVRY
RGPVSKHSGVYFGIEFLGADSRKGYTDGLWNKKRFFSCAENGGVFVAACRLEPDEEARVQ
GRAGGDPCRSELTGRQAPALQPGSRVYFKQAGTLRFGQVKYCGACSGKAEGGVYVGIQLD
CPVGNWDGWVDGRQLCTITDPDYGILLPLRDVHPVSDRENKITAPESLRHPTLDDKETSP
FKLKEDQMRRGGSHSLTGLVSEPYGVWSSVPSEKGRRGLPLEVESMVEVNSPPLYGVIRW
IGEVPTQTETLAGLEMEVALQTGCTDGTYCGRRYFRCPPNKALFVKLKTCRPDSRFHSLS
PSGNPVERFNSLDFKNCNSPRVRENTPPEKGRAAMDVIQGWRKGIQGHCNSCYLDATLFC
MFAFNSVLDTLLLRPRATDDSELYSETRDLLRTEIVNPLRRDGYVSATKVMALRKILEGA
GSSTGFTSEEKDPEEFLNQLFQLLKTEPLLKIRAGRQEPQDCTSHQIFFQDKGSIRIPTV
QKLLELSFQHSDLKLTEAPSCLILQMPRFGKNFKMFDLVLPTLELNITDLLEDTPRECRI
CGQLAYVECRECYKDPDLAPGKVKQFCVACSEQVHRHLTRKNHNPCPVLLPEELRGKVEF
PGIIPQQTMQLFAVLCIQTSHYVAFVKHGTGDDHWLFFDSMADREGGQNGFNIPRVEQCP
EVADYLAMKPEDLEAMDPKAIPSSARRLLLDASMCFYYSQSLCLYK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
ggcggctggagcgaccggccttcgagcttctggaggggagtgagcgaccccgagaagagg
ctggccctgtcagccaacgggccctggctggcctgggccggggggctgacacccggcacg
agggtccgcgtcaggatgagctcctcctccgaggagtgggcccagggtgtagtccgttac
cgaggacccgtcagcaaacattccggagtatattttggcatcgaattcctgggtgcagac
tccaggaagggctacacggacggactctggaacaagaagcgtttcttcagctgcgccgag
aacggaggtgtgttcgtggcagcctgtaggctggagcctgacgaggaggcccgagttcag
gggcgggcggggggcgacccctgcaggagcgagctgactgggcgacaggcccctgccctc
cagccgggcagccgggtctacttcaagcaagcgggcaccctgaggttcgggcaggtcaag
tactgtggagcctgctcgggtaaggccgagggcggcgtttacgtgggaatccagctggat
tgtcctgttggcaattgggacggctgggtcgacggtcggcagttatgtaccattaccgac
ccagattacggaatcttgctgccccttcgcgacgtacatcctgtttctgaccgggagaat
aagattacagccccagagtccctccgacatcccactctcgatgacaaagaaaccagtccc
ttcaaactgaaggaagaccagatgaggcgcgggggaagccattcgctgacaggattagtc
agcgagccgtacggggtatggagctccgtgccgagcgagaagggaaggagaggattgccc
ctggaggtggagtcgatggtggaagtgaacagcccacctctctatggggtcattcgctgg
attggagaggtgcccacgcagactgagaccctcgctgggctggaaatggaggtggctcta
caaactggctgcacagacggcacctactgtggtcggcgttatttccgatgccccccgaac
aaggccctgttcgtcaagctgaaaacctgtaggcccgactcccggttccactctctgtct
ccttcaggcaatcccgtcgaacggttcaactcactcgatttcaagaactgcaacagcccg
agagttagggaaaacacacctccagaaaagggacgagcagcgatggatgtcatccaaggc
tggaggaaaggaattcagggtcattgcaactcctgttacctggacgccactctcttttgc
atgtttgccttcaattcagtgcttgatacactcctgctgcggcccagagcgacagacgac
agtgagttgtacagtgaaacccgggacttactgcggacagagatcgttaatcctctgcgg
agggacggttacgtcagcgcgaccaaggtgatggcgctgcggaagattctggaaggagcc
gggagctccacagggttcaccagcgaggagaaagatccggaagaattcctgaaccagctt
ttccagctgctgaagacagagcccctgctgaaaatcagagcagggcgacaggagccacag
gactgcacttcccaccagatatttttccaggataaaggttccatccggattcccaccgtg
cagaagctgctggaactttccttccaacacagcgacctgaagctcaccgaggctccgtcc
tgtctgattctacagatgcctcggttcgggaagaatttcaagatgttcgacctggtcctc
cctacgctggagctaaacatcaccgacctgttggaggacacccccagggaatgccggata
tgcggacagctggcctatgtggaatgccgggaatgctacaaggatcctgacctggctccc
gggaaggttaagcagttctgcgtggcctgcagcgagcaggttcatcgtcatctgacgaga
aagaaccacaacccctgtccggtcctgctccctgaggagctgagggggaaggtggaattc
cccgggatcatcccgcagcagaccatgcagctctttgccgtgctgtgcatccagaccagt
cactatgtggccttcgtcaagcacgggacaggagacgaccattggctcttctttgacagc
atggcagaccgggaaggcgggcagaacggatttaacatccccagggtagagcagtgcccg
gaggtggccgactacttggcaatgaaaccagaggatctggaggctatggatcccaaggcg
attcccagctctgctcgccggctgcttctagatgcttccatgtgtttctattatagtcaa
agcttgtgtctgtacaagtga
DBGET
integrated database retrieval system
