Scyliorhinus canicula (smaller spotted catshark): 119952058
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Entry
119952058 CDS
T11175
Symbol
acsl4a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau00061
Fatty acid biosynthesis
scau00071
Fatty acid degradation
scau01100
Metabolic pathways
scau01212
Fatty acid metabolism
scau03320
PPAR signaling pathway
scau04146
Peroxisome
scau04216
Ferroptosis
scau04920
Adipocytokine signaling pathway
Module
scau_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
119952058 (acsl4a)
00071 Fatty acid degradation
119952058 (acsl4a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119952058 (acsl4a)
09143 Cell growth and death
04216 Ferroptosis
119952058 (acsl4a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
119952058 (acsl4a)
03320 PPAR signaling pathway
119952058 (acsl4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
scau01004
]
119952058 (acsl4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119952058 (acsl4a)
Enzymes [BR:
scau01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
119952058 (acsl4a)
Lipid biosynthesis proteins [BR:
scau01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
119952058 (acsl4a)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of breast milk
119952058 (acsl4a)
Exosomal proteins of breast cancer cells
119952058 (acsl4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CelTOS
Motif
Other DBs
NCBI-GeneID:
119952058
NCBI-ProteinID:
XP_038631486
LinkDB
All DBs
Position
17:complement(27375886..27477851)
Genome browser
AA seq
710 aa
AA seq
DB search
MHLKQEVHCIFLLPIYLLMWLYTTLTFIPWYFLSDAKKKKAMAKRLKAKATSEKPGSPFR
SVDHFDSLAKMDFPGLDTVDKLFEAAEKKFRKQHCLGTRELLSEENEVQVNGKVFKKLIL
GEYKWLSYEEVNQHVNCFGSGLTALGLKAKDMIGIFCETRAEWMIAAQACFKYNFPLVTI
YSTLGEDAVAYGLNESEITHLITSAELLDTKLKKVLPKIQMLKHIIYVDNKVINTSGYSE
TLQIHSMESVEELGAKPENMDITPSRPVPSDLAVVMYTSGSTGHPKGVMMIHSNLIAGMT
GQCQRIPGLGPKDTYIGYLPLAHVLELTAEISCVAYGCRIGYSSPQTLSDQSTKIKKGSK
GDCSILRPTLMAAVPEIMDRIYKNVMSKVQEMNYVQRTLFKLGYDYKLEQIKRGYDAPLC
NMLLFKKVKSLLGGNVRMMLSGGAPLSPQTQRFMNVCFCCPVGQGYGLTETCGAGSITEV
LDYSTGRVGAPLICCEIKLRDWEEGGYTTNDQPHPRGEILIGGPNVAMGYFKLNKSSHDF
FEDNTGQRWFCTGDVGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVESALKSCSLIDNI
CAYANSEQSYVISFVVPNQKKLTALAEQKQVQGTWEEICNDSKMEAEVLREIKEASASSK
LEKFEVPVKVRLSPEPWTPETGLVTDAFKLKRKELKNHYLNDIERMYGGK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaaacaagaagtgcattgcattttcttgcttcctatctacctattgatgtgg
ctttacacaaccctcacctttatcccatggtatttcctctctgacgcaaagaagaaaaag
gctatggcgaaacgactaaaggccaaggccacgtccgagaaaccaggcagcccattccgt
tccgtggatcactttgactcccttgccaaaatggacttccctggattggacacggtcgat
aagctctttgaagcggctgagaagaaatttcggaagcagcactgtttgggcacaagagag
ttgttgagtgaagaaaatgaggtccaagtcaatggaaaagtatttaaaaagctaatcctc
ggggaatataaatggctaagctatgaagaggtcaatcagcatgtaaactgctttggcagt
ggcctgactgccttgggactgaaggcaaaggatatgattggcatcttctgtgaaaccaga
gctgagtggatgatcgcagcacaagcctgcttcaagtacaatttcccacttgtaacaatt
tactccacccttggagaagatgctgtagcttatgggctgaacgaatccgaaataacacat
ctcatcactagcgcggaactccttgacacaaagttgaagaaagtcctgccaaaaattcag
atgttgaaacatatcatttacgtggacaacaaggtcatcaatacttcaggatactcagaa
actcttcagattcacagtatggagtctgtggaagagcttggagccaaacctgagaacatg
gatataaccccatctcggcctgttccatcggacttggctgtggtgatgtacacaagtggc
tctacaggtcatccaaagggagtgatgatgatccacagtaacttaatagccggtatgact
ggtcaatgtcaaaggatacccgggctgggacccaaagatacatatattggttatctgcca
ttagctcacgtgttggaacttactgcagagatttcctgcgttgcctacggctgtcgaatt
ggttattcatctccccaaaccctgtctgatcagtcaactaagatcaaaaagggcagtaag
ggtgactgttccatcctgaggccaacactgatggcagctgttccagaaatcatggatcga
atctataaaaacgtaatgagcaaggtgcaggagatgaactacgtacagaggactctgttt
aaactaggttatgattacaaattggagcagatcaagagaggatatgatgcacccctctgc
aacatgctattatttaaaaaggtgaaatctctgttgggaggaaatgttcggatgatgctg
tctggaggagctcctctttctcctcaaacgcaacggtttatgaatgtgtgtttctgctgc
ccagtcgggcaaggttacggcctgactgaaacatgtggtgctggatctatcactgaagtg
ttggactacagcacaggcagagttggagccccactgatctgttgtgaaatcaaactgaga
gactgggaagaaggtggatacacaactaatgaccagccccatccaagaggagaaatactg
attggtggaccaaatgtggcaatggggtacttcaaactaaataaatccagccatgatttt
tttgaggacaacactggtcagcgttggttttgcacaggtgatgttggtgaattccaccca
gatggctgcttacagataattgatcgcaagaaagatttagttaaactgcaagctggagaa
tacgtatctctgggcaaggtggaatctgccttaaagagctgttccctcattgataatatt
tgtgcgtacgcaaacagtgagcaatcttacgtgattagttttgtggtgcccaatcagaag
aagctgactgctcttgcggagcagaaacaagttcagggaacgtgggaggaaatttgtaac
gatagcaagatggaagccgaggtgctgcgggagatcaaagaagcatcggcgtccagtaaa
ttagagaagtttgaggtccctgtgaaggttcgtttgagcccagagccatggaccccagag
actggtttggtaacggacgccttcaagctcaagaggaaagaactaaagaaccactacctc
aatgatattgagaggatgtacggagggaagtaa
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