Scyliorhinus canicula (smaller spotted catshark): 119952305
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Entry
119952305 CDS
T11175
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like isoform X1
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04080
Neuroactive ligand-receptor interaction
scau04082
Neuroactive ligand signaling
scau04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119952305
04082 Neuroactive ligand signaling
119952305
04519 Cadherin signaling
119952305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scau04040
]
119952305
Ion channels [BR:
scau04040
]
Ligand-gated channels
GABA-A
119952305
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119952305
NCBI-ProteinID:
XP_038631878
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Position
17:101060050..101332417
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AA seq
477 aa
AA seq
DB search
MWRFQEERMSGLCSFLTGLCVMCWLQSVNGIGNISLVKRTVDRLLRGYDIRLRPDFGGSP
VTVGMSIHIASIDMISEVNMDYTITMYFQQGWRDKRLSYTALPLNLTLDNRVADQLWLPD
TYFLNDKKSFLHGVTVKNRMIRLHPDGTVMYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIVFHWEGGDTAVTGVDNLELPQFTIVELSLVSKEVVFATGSYPRLSLSFRIK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKVPSQQKKPMGKVNKSNTERGRLGNAR
VDAHGNILLSTLELNDEVLPSEVASSVSDSRNSVMSFDSSGIQFRRVGSRDGLGLNTTRE
RNVDRELAKSRLRRRSSKLKLKIPKLTDVSAIDKWSRVVFPITFGFFNVIYWLYYVH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggtttcaagaggagcggatgtctggtctttgctcatttctcacaggtctgtgt
gtcatgtgctggcttcaaagtgtcaacggaatcggtaacatttcccttgtgaaaagaaca
gtggacagattgctcagagggtacgacatccgtctcagacctgactttggagggtcgcca
gttacagtggggatgagtattcatatagccagcatagacatgatctcagaagttaacatg
gattataccatcactatgtatttccaacaaggctggcgggacaaacgcctatcgtataca
gcactcccactcaacctcactctagacaaccgagtcgctgaccagctctggctcccagac
acctacttcctgaatgacaagaaatcctttctgcatggggtgacagtgaaaaaccgcatg
atccgtctgcatccggatggcaccgtgatgtatggactcaggattaccaccacagcagcg
tgtatgatggatctgcggagataccccctggatgagcagaactgtacattggaaatagag
agctatggctacacgacggatgacattgtatttcactgggaaggtggtgatacggcagtg
acaggggtggacaatctagaactgcctcagttcacaatcgttgaacttagcttggtttca
aaggaagtggtttttgcaacaggttcttaccctcgcctgtcactcagttttcgtatcaag
aggaatattggatatttcattctgcagacctacatgccatcaatcctcatcaccatcctg
tcctgggtctccttctggattaattatgatgcttcagctgcccgggtggctctgggtgtt
acaactgtactcactatgacaacaatcaacacccacctacgggaaacccttccaaagatc
ccttatgttaaagccattgacatctatctgatgggttgctttgtctttgtcttcctggct
ttgctcgagtatgcctttgtcaattacatcttctttggcaaagtgccatcacagcagaag
aaaccaatgggaaaagtcaataagagcaacacagagaggggcagacttgggaatgcccgg
gtcgatgcacatggaaacatcctcttgagcaccttggaactgaacgatgaagtgctgcca
tcagaggttgccagcagcgtgagtgattcccgcaattccgtcatgtcctttgacagctct
ggaatccagttccgcagggtaggatccagggatggtttaggactcaacaccaccagagag
cgcaacgtagaccgtgaactcgccaaaagccgtctgcgtcgccgatcctccaaactcaag
ttgaagatcccaaagttgacggatgttagtgcaattgacaaatggtcaagagtcgtgttc
cccataacctttggcttcttcaatgtcatctactggctatactatgtgcactga
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