Scyliorhinus canicula (smaller spotted catshark): 119952325
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Entry
119952325 CDS
T11175
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03420
Nucleotide excision repair
scau04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119952325 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
119952325 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scau04121
]
119952325 (cul4b)
03400 DNA repair and recombination proteins [BR:
scau03400
]
119952325 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
scau04147
]
119952325 (cul4b)
Ubiquitin system [BR:
scau04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
119952325 (cul4b)
DNA repair and recombination proteins [BR:
scau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119952325 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119952325 (cul4b)
Exosome [BR:
scau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119952325 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
119952325
NCBI-ProteinID:
XP_038631906
LinkDB
All DBs
Position
17:42838042..42939297
Genome browser
AA seq
842 aa
AA seq
DB search
MFRTGLSSQNSPQEVRQQADVSPRKRKLAEAGEFEHQHQPPQQAQLFPSAAPKSSSSSST
SSTCCNHQLQKRVKFEDSLDFVGLDVMMAEEQQRKNSGCSVLAGHANGLTKSTTFANSKP
GTAKKLVIKNFKDKPKLPDNYTNETWQKLKEAVEAIQKSISIKYNLEELYQAVENLCSYK
VSANLYKQLRQVCEDHIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLD
RTYVLQNSMLPSIWDMGLELFRSHVISDRKVQNKTIDGILLLIERERNGEAIDRSLLRSL
LSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITY
LDQSTQKPLIATVEKQLLGEHLPAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL
QHWIEYIKTFGSTIVINPEKDKTMVQELLDFKDKVDHVVDVCFLKNEKFVNAMKEAFETF
INKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDL
AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFRDMELSKDIMIQFKQYMQNQNI
PGNLELTVNILTMGYWPTYVPMEVHLPLEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCV
LKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKTATGIEDGELRRTLQSLACGKAR
VLTKTPKSKDVEDYDKFTCNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQID
AAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENTNQYNY
VA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacgggcctctcttcacaaaattcaccgcaggaggtgcgacaacaggctgat
gttagtccgaggaagcgaaagttagccgaggccggcgaattcgagcaccagcaccaacca
cctcagcaagcccagctcttcccctccgccgcccctaagtcttcctcctcctcctccacc
tcctccacctgctgcaaccaccagcttcaaaagagagtcaagttcgaggactcgctggac
tttgttggactcgatgtgatgatggcggaggagcagcagaggaaaaacagcggctgttcc
gtactcgcgggacatgccaacgggttgaccaagtcgaccaccttcgccaacagcaagccg
gggacggccaaaaaattagttattaaaaatttcaaagataaacctaaattacctgataat
tacaccaatgaaacttggcaaaaactgaaagaagccgtagaagcaattcagaagagcatc
tcaatcaaatacaatttggaggaactttatcaggctgttgagaacctctgttcttataaa
gtatcggcaaatttatacaaacagctgagacaagtctgtgaggatcatatcaaagctcaa
attcaccagttcagagaagattccttagatagtgtcctgtttctaaagaaaatagataaa
tgctggcaggaccattgcagacaaatgatcatgattaggagtatcttcttgtttctggac
agaacttatgttctccaaaattcaatgcttccatctatttgggatatgggccttgaatta
ttcagatcccatgtaataagtgatcggaaggttcagaataaaactattgatgggattctt
ctgttaattgagagagaaagaaatggggaagctattgatcgtagtttgcttcgaagtctc
ttaagtatgctatcagatttgcagatatatcaagattcatttgaacaaagatttttggaa
gagactaaccgtctgtatgctgcagaaggtcaaagactgatgcaagagagagaggttcca
gagtatttgcaccatgttaataagcgtttagaggaagaagcagatcgggttatcacttac
ttggatcagagcacacagaagcctctaatagcaacagtggaaaaacaacttttaggtgaa
catttaccagccattcttcagaaaggtttaaacagtcttttggatgaaaacaggatacaa
gatctttctcttctttaccagctttttagtagagttcgaggtggcgtacaggttcttctg
caacattggattgaatatataaagacctttggcagtacaatagtaattaatcctgaaaaa
gacaaaacgatggttcaagagctgttagatttcaaggacaaagtggatcacgtagtagat
gtctgctttctgaagaatgaaaaatttgtcaatgcgatgaaagaagcctttgaaaccttc
ataaacaaacgacctaataagccagctgaactaatagccaaatatgtagattcaaagctt
cgagctggcaacaaagaggctacagacgaggaacttgaaaagatgctggacaaaattatg
atcatatttagattcatttatggaaaagacgtatttgaggctttttacaagaaggattta
gcaaagagactattggtaggaaagagtgcatcagtagatgcagaaaaatcgatgctgtcc
aaattaaagcatgaatgtggagctgcattcaccagcaaactggaaggaatgtttagagac
atggagctctcaaaagatattatgatccagtttaaacagtacatgcagaatcaaaatata
cctggcaaccttgagctaactgtaaatatcctcacaatgggctactggccaacttatgta
ccaatggaagttcatttacccctggagatggtgaaacttcaggagattttcaagacattt
tatctcggcaagcacagcggtagaaagttgcaatggcaatcgactttgggtcattgtgta
ttgaaagcagaatttaaagagggtaagaaagaacttcaagtgtcgcttttccaaacgctg
gtactactcatgtttaatgaaggggaggaattcagtttagaagaaattaaaactgcgact
ggaatagaggatggagagttgcgacgaacattacaatctttggcatgtggcaaagcacgt
gtactgacgaagacgccaaaaagcaaagatgtggaagattacgacaaattcacttgtaat
gatgatttcaaacataagttgttcaggatcaagattaatcagatccagatgaaagaaacg
gttgaagaacaggccagtactactgagagagtgttccaggacagacagtatcagatagat
gctgctattgtccgaatcatgaaaatgagaaagactttgagccacaatctccttgtatct
gaagtgtataatcagttgaaatttccagtcaagcctgctgatctaaagaaaagaatagag
tcattaattgacagggactacatggaaagagacaaagaaaataccaaccaatacaactat
gtggcatag
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