KEGG   Scyliorhinus canicula (smaller spotted catshark): 119952405
Entry
119952405         CDS       T11175                                 
Name
(RefSeq) claudin-2-like
  KO
K06087  claudin
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03272  Virion - Hepatitis viruses
scau04382  Cornified envelope formation
scau04514  Cell adhesion molecule (CAM) interaction
scau04530  Tight junction
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    119952405
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    119952405
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    119952405
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    119952405
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:scau03037]
    119952405
   04147 Exosome [BR:scau04147]
    119952405
Cilium and associated proteins [BR:scau03037]
 Other cilia and associated proteins
  Stereociliary proteins
   119952405
Exosome [BR:scau04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   119952405
  Exosomal proteins of colorectal cancer cells
   119952405
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like DUF4328 TMEM_230_134
Other DBs
NCBI-GeneID: 119952405
NCBI-ProteinID: XP_038632054
LinkDB
Position
17:complement(52632780..52665101)
AA seq 235 aa
MANSAMQLVALIVCIIGMVGTLSATIMPHWRITAHIGANVVTAIIYMKGLWWACAMFSTG
VFQCETYNSVLELPPDLQAARAMMVISVALSLLAITVSVVGMKCTVCAKDSPLKDKVAGT
GGVLFIVAGLSGLVPVAWTMNGVILNFHNPLIPGDLKFEIGESLYLGVVAAMLTVIGGVI
LSLSFIGRRTEPYSRRPMSYQNPAANRSAPAPSAASLHSKAAKAEFDSYNLTGYV
NT seq 708 nt   +upstreamnt  +downstreamnt
atggctaactctgccatgcaattggtagcattgatcgtgtgcataatcggcatggttggg
acattatcagctactattatgccccactggaggatcacagcacacattggggcaaatgtt
gtaactgctattatctatatgaaagggttgtggtgggcatgtgccatgttcagcaccggt
gtcttccaatgtgaaacctacaattccgtcctggaactcccgccagatctccaagctgcc
cgtgctatgatggtcatctcagttgctctctcactgctcgctataacagtctccgtggtt
ggcatgaaatgcactgtgtgcgccaaggattctccattaaaagacaaggtggccggcact
ggaggagttttatttatcgtggctgggctaagtggattggtgccagtagcctggacaatg
aatggagtgatactgaatttccacaacccactaattcctggcgatctcaagtttgaaatc
ggtgagtccttgtacctgggggtcgttgccgccatgctgaccgtcattggaggtgtcata
ctgtccctgtcatttataggtaggagaactgagccgtacagtagacgaccaatgtcatac
cagaatcccgcagccaaccgttcagctcctgcaccatcggctgcatctctccattcaaaa
gcagcgaaagcagaattcgactcttacaatctaactggttatgtgtag

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