Scyliorhinus canicula (smaller spotted catshark): 119952419
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Entry
119952419 CDS
T11175
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04060
Cytokine-cytokine receptor interaction
scau04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
119952419
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
119952419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scau04052
]
119952419
04090 CD molecules [BR:
scau04090
]
119952419
Cytokines and neuropeptides [BR:
scau04052
]
Cytokines
Tumor necrosis fators
119952419
CD molecules [BR:
scau04090
]
Proteins
119952419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Col_cuticle_N
DUF6377
MBR1
Motif
Other DBs
NCBI-GeneID:
119952419
NCBI-ProteinID:
XP_038632086
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Position
17:complement(24006881..24041226)
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AA seq
273 aa
AA seq
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MQPKCWTKLPESRSRCTSRGLIGTMVILFLAVLCCLSLLVILLQQISDLRSELAKVHKQL
DVFNKRGIINPADNPVGHERETENQSENLKKNNNVKFQIKEQKTGVNEKNYDLRSISRKK
RDVRPCEKQRSFLQLIPNAKQSIILQADDSTFIPWIVASRRGEALEATSNKIVVKENGYY
TVYSQVLYYDNCMAMGHVVQRRKANVVGDERRIMTLFRCIQNMPNNTASNTCFTAGIVKL
DQEDELELLLPSRPNANISMDKDSTFFGAIQLL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccaaatgttggactaaattaccagaatcaaggagcagatgtacctccagaggg
ctgattgggactatggttattctcttcttggctgttttatgctgtctgtcactgcttgtg
attttactgcagcaaataagtgacctccggagcgaactggcaaaagtccacaaacagctc
gatgtttttaacaagagaggaataataaaccctgcggataatccagtgggacatgaaaga
gaaacggaaaatcagtctgaaaatctaaaaaaaaataataatgtcaaattccaaataaaa
gaacagaaaactggagtgaatgagaagaactatgacctcaggagcatctcaaggaaaaag
agggatgtaagaccgtgtgaaaaacagcgatcattcctccagctgattcctaatgccaag
caaagcattattctgcaagcagatgattcaacctttattccttggattgtggcttcaagg
aggggtgaggcattggaggcaacttccaataaaatagttgtgaaagaaaatggctattac
acagtatacagtcaggttctgtactatgataattgcatggccatgggccatgtcgtccag
agaaggaaggctaatgtggttggggatgagcgacgtataatgacgctatttcgctgcatt
caaaacatgccaaacaacacagccagtaacacctgttttactgctggaattgtgaagctt
gaccaagaggatgagttggaactcctgttaccatcccgacccaatgctaacatctccatg
gacaaagattcaacattttttggtgccatacaattactatga
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