Scyliorhinus canicula (smaller spotted catshark): 119952839
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Entry
119952839 CDS
T11175
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119952839 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scau02000
]
119952839 (slc1a6)
Transporters [BR:
scau02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
119952839 (slc1a6)
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
119952839
NCBI-ProteinID:
XP_038632290
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Position
18:101049844..101189799
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AA seq
558 aa
AA seq
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MSERQTNVNSLFLNEDSGKRNTADSRVQRFQKAVRKRAGRATKSLSSISRQSVQSFLKKN
AFVLLTIFAVILGIILGFTLRPYKLSYREIKYFSFPGELLMRMLQMLVLPLIVSSLVSGM
AALDSKASGKMGIRAVVFYMVTTVIAVFIGIVMVMIIHPGKGSKVDLHREGKIEQVQAAD
AFMDLIRNMFPPNLVEACFKQYKTNYGTRKVMIPTSSPINLTTSTEPSMMDNITEAFKQL
QKLMLDEEVIPIAGSSNAVNALGLVVFSIAFGLVVGNMKQQGRPLKEFFDCLNEAIMRLV
AIIIWYAPIGILFLIAGKIMEMQDLTVMGGQLGMYTVTVIVGLLIHALVVLPLLYFIVTR
KNPWVFIGGILQALITALGTSSSSATLPITFKCLEENNGVDKHVTRFVLPVGATINMDGT
ALYEALAAIFIAQVNNYDLNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPT
EDITLIIAVDWFLDRLRTTTNVLGDSVGAGIVEHLSRHELHRSDAEVGNSVIEENEKPYQ
LICQEHENQKQLDSETMM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacggcagaccaacgtcaacagccttttcttgaatgaagactcgggcaagcgg
aatacggcagacagccgagtccagcgcttccaaaaggcggtgaggaagcgggctggccgg
gccacgaaaagcttgagcagcatcagccggcaaagcgtgcagagctttctcaagaaaaat
gcctttgtccttttaactatctttgccgtcatactgggtataattctagggtttaccctc
cgcccctacaaactgtcctatcgtgagattaagtatttctctttcccgggtgagttgctg
atgaggatgctgcagatgttggtgctcccactcattgtttccagtctagtttcaggtatg
gcagccctggatagcaaagcatcgggtaagatgggaatccgagctgtggttttctacatg
gtaaccactgtcatcgctgtgttcattggaattgtcatggtaatgatcatccatcctggg
aaaggatcaaaagttgacctacatcgggagggaaagattgagcaggtgcaggccgctgat
gctttcatggatctaatcaggaatatgttcccacccaatctagttgaggcttgtttcaaa
cagtacaaaacaaattatggcacacgaaaagtcatgatacccacgtcatcacccatcaat
cttacaaccagcacggaaccttccatgatggacaacataactgaagctttcaaacaattg
cagaagttgatgcttgatgaggaggttataccgattgctggttcatccaatgcagtgaat
gcactgggtctcgtagtcttctccattgcttttggtcttgtagtcggcaacatgaaacag
caaggccggccgctgaaggaattttttgactgccttaatgaagccatcatgagattggtt
gcaattataatctggtatgcccctataggtatcctcttcctgattgcaggcaaaatcatg
gaaatgcaagacctgaccgtgatgggtggacaattgggaatgtacactgtgacggtgata
gttgggctgctaatccatgcactcgttgtcctgccacttctttattttatagtcacccgc
aagaatccctgggtttttattggtggaatactgcaggcattgatcacagcacttgggact
tcatccagttcagcaactctcccaatcacctttaagtgtctggaagaaaataatggtgta
gacaagcatgttacccgctttgtccttccggttggagctactattaacatggatggcaca
gcactctatgaggccctggctgccatctttatcgcacaggtcaacaattatgatctaaac
tttggacaaatcatcactatcagtatcactgcaacagcagccagcattggagctgccgga
ataccacaggctggtcttgttaccatggtgatagtgttgacatccgttggacttcccaca
gaggacatcaccctgatcatcgcagtggactggttcctggatcgtctccgaactaccact
aatgtgcttggcgactcagtgggagcgggcattgtggagcacctgtcaaggcatgaactg
cacagatcggatgcagaagttggaaattctgtcattgaagaaaatgagaagccttatcag
ctgatctgccaggagcatgaaaaccagaagcagctggatagcgagaccatgatgtga
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