KEGG   Scyliorhinus canicula (smaller spotted catshark): 119952912
Entry
119952912         CDS       T11175                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
scau  Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119952912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:scau03041]
    119952912
Spliceosome [BR:scau03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119952912
 Complex B
    119952912
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C DUF8489 RRM_occluded RRM_7 Transformer
Other DBs
NCBI-GeneID: 119952912
NCBI-ProteinID: XP_038632469
LinkDB
Position
18:<59335427..59377785
AA seq 455 aa
LPLLLEREKERHKKKSRSVSRSRSRDKKRRSRSRDKRSRSRGGRSRSRDKRSTSRERKRH
SRSPRRSRRKKPYRYWDVPPPGFEHITPMQYKAMQAAGQIPATALLATSTVGGVTITPTQ
VPIIGSQMTRQARRLYVGNIPFGVTEEAMADFFNAQMRLAGLSQAPGNPVLAVQINQDKN
FAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEQPSFHVPGVVSTVVPD
SPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGYAFCEYVDINVTDQL
AIAGLNGMQLGDKKLIVQRASVGAKNANPSAIIQTPVTVQVPGLPSLQAQNTGLPTDVLC
LLNMVSPDELIDDEEYEEILEDIREECSKYGTVKSIEIPRPLDGLEVPGCGKIFVEFISP
LDCQKAMQALTGRKFANRVVVTKYYDPELYHRRDF
NT seq 1368 nt   +upstreamnt  +downstreamnt
ttgcctttacttttagaacgagaaaaggaacggcacaagaagaaaagccgaagtgtttcc
agaagcagaagccgggataaaaaacggagaagtcgaagcagagataagcgcagccgaagt
cgaggcgggcgaagcagaagcagggataagcgaagcacttcacgagaacggaagcgtcac
agtcggtctccccgtcgctctcgtagaaagaagccctacagatactgggatgtgcctcct
ccaggctttgagcacattaccccgatgcagtacaaggcaatgcaagctgcaggtcagatc
cctgctacagcactgttggcaacctccacagtaggtggtgtgacgatcacaccaacacag
gttcctatcattggcagccaaatgaccaggcaggccagacgattgtatgttggcaacata
ccctttggtgtcacagaggaagccatggcagacttctttaatgctcagatgcgccttgct
gggttgtcgcaggctccagggaaccctgtactggctgtgcagattaatcaagataaaaac
tttgcttttctcgagttccgttcagtcgatgaaactacacaagccatggcgtttgatggc
atcatcttccagggtcagtctttgaagatccgacgtccccatgattaccaacctctgcca
ggcatgtctgagcaaccttctttccatgttccaggtgttgtctccacagtggttccagat
tctccacacaagcttttcattggcggtttgcccaattacctcaatgatgatcaggtgaaa
gagcttctgacttcatttggccctcttaaagcttttaacctagtaaaggacagtgcaaca
tctctatccaaaggttatgccttctgtgaatatgtggatatcaatgttactgatcagttg
gcaatcgcagggttgaatggaatgcagcttggggataagaagcttatagtgcaaagggcc
agcgttggtgcaaagaatgccaatccgagtgccattatccaaacaccagtgaccgtacag
gtaccaggccttccatcactgcaagctcagaacacggggctacccactgacgtgttgtgc
ctgttaaacatggtgtcaccagatgaacttattgatgatgaggagtatgaggaaatcctg
gaggacattagagaagagtgtagcaaatatgggactgtgaaatccattgaaatccctcga
ccactggatgggctagaagtgcctggttgcggcaagatatttgtagaattcatctctcca
ctagactgccaaaaagcaatgcaagcactaacgggccgaaagtttgccaacagagttgta
gttaccaagtactatgacccagaattgtaccacagacgtgacttctaa

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