Scyliorhinus canicula (smaller spotted catshark): 119952960
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Entry
119952960 CDS
T11175
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Pathway
scau03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119952960 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scau03009
]
119952960 (rexo1)
Ribosome biogenesis [BR:
scau03009
]
Eukaryotic type
Pre-60S particles
RNases
119952960 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
Motif
Other DBs
NCBI-GeneID:
119952960
NCBI-ProteinID:
XP_038632532
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All DBs
Position
18:complement(109407986..109522022)
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRSTEFFRSIECPFYGDGGVSSCNRPYCHFRHRSQKPRERPEADGQPLAADRELGYDPY
NPELPKGSSRNENGISGDLTESSSSTLELELVNKAIEVVKNEVEQEQKKLSRYEDLLDTE
EEYVPSTPSAQKTLGKTKSCKELLPIEDKLTKSLEYNPDSYRRISNVEYTPTPLSITASF
SKYTLDTDDEADAKGSSLKYVPTLVTKPVKYATSVPSHKYVIDNTKPCTDLEYDPLLNYS
ARLMNKKKTREQGTKRLRESSSEERNTAAAKKRCHRLKSSKCDMGLAFPDSGEELSNTYP
QSHGDTSKFQNPVLCDNKSDEGLSLKAKDLNKRSMKEIAVQYDVDDVCCFESNQQENRGK
QKLKATSHSSKISKYNKEELKVRESKEKKNKGSDLDGSKVKVKKDKIDSTKSKSSHHSEK
ASKKGKIKCDKNRLEVKREKQGEKLKNKEKNGVNLVIEKKHKGDEKHKVKEEQQKIKSDG
SFSRKMEKGKTSKLNGVKSEKQSKSRSNSSSVSAGKIKCHGGKITSIQKSDKKNDNSKSK
TLMHKNGIHVGSKRKDEEIKGSKSVKDKAKRLENRKENSCFAKRTLSHTELFGDDSSDEE
STSKPVTAMTYKSDSDSDRDPCSNSSDDETGGNLEQRSLSSEEEVDFPSLEKDFEFESDP
MEECLRIFNESKEVKNEDKGRVSKQVSMESNEDKESSLTTLFPGQKRRISHVAKQENVEP
AKPVIRPFRRFTAQEVCYQRGLMAQQQAAQLVEVKKAVSTSFTNRAEKKRIAHKPKADGT
PSARHDVEMPALPSARQSPVKPKMESINRTVVSLNCPRNSNLNLKSQTIAGMAPKTVTTT
AQRRIAHAPTLKSSLKRPTIPTEYGSKVPTNVRQRYLNVFIDECLKFCGSEQMAFEKALS
EEETVYQRSTSRTVYLNVAVNTLKKLRSQNDTIPSPTKQTAAVDANKKVQSHEAMLGGKL
AMKTSFTLNRSGKQQDVELAGAMLYKRLTEYVLTEEQLQENCYPRPHPEKPGVAVLYNQD
ERKNITDPLLRICCRCGSEYSVSIRGDCIRKEECNYHWGRLRRHKIPGGWETQYSCCGGA
VGSAGCQTAKQHVQDGRKVKLAGFMKTFDKEIPPDENPGVFALDCEMCYTKQGLELTRLT
VINPNLKVVYDTFVKPDSKVIDYNTRFSGVTEEDMEGTTITIRDVQAVLLNMFSAETILI
GHSLESDLFALKLMHSTVIDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVEGHDSSE
DACACMELMMWRLKEDAKLRR
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttccaccgagtttttccgcagcatcgagtgcccgttttacggcgatggcggc
gtctcctcctgtaaccggccctattgtcacttcaggcaccgcagccagaagcccagggag
aggcccgaggcggacgggcagcctctagcagccgaccgagaacttggttacgatccatat
aatcctgagcttcctaagggttcgtccagaaatgaaaatgggatatcaggtgaccttaca
gaatccagctccagtacgctggaattggaactggtcaataaagccattgaggttgttaag
aatgaagttgaacaagagcagaaaaagttgtcaagatatgaggatcttctggatacagag
gaggagtatgtcccttcgacaccatcagcacagaagacacttggcaagaccaagagttgc
aaagagcttttacctattgaggataagttgacaaagtctttggaatataatccagacagt
taccgccgaattagcaatgtagaatacacccctactccactttcaattactgcttctttc
agtaaatatactttggatacagatgatgaagctgatgcaaagggtagttcgttaaaatat
gttccaacgctcgtgactaagccagtcaaatatgctacctctgtacccagtcataaatat
gtgatcgacaataccaagccatgcactgatttagagtatgatcctttgttgaactattca
gcacggctgatgaacaaaaaaaagacaagggaacagggaaccaagaggctcagagagagc
agctcggaggaacgtaacacagctgctgcaaagaaacgctgccatcgcttgaagtcaagc
aaatgtgatatgggtttggcattcccagactctggagaggaacttagtaatacctatccg
caaagtcatggggacacttcaaagtttcaaaatcctgtgctttgtgacaataaatcggat
gaaggattatctttaaaggctaaagacttgaataaacgatctatgaaagagattgcagtt
cagtatgatgtagacgatgtttgctgttttgagagcaaccaacaggagaatcgagggaaa
cagaagttgaaagccaccagtcattcatctaagatttcaaaatacaacaaggaggagctc
aaagtacgagaaagtaaagagaaaaagaataaaggtagtgacctagatggttccaaagta
aaggtgaaaaaggataaaatagacagcactaaaagcaaatcttctcaccactctgagaaa
gctagtaaaaaggggaaaataaaatgcgataaaaacagactagaagttaagcgagaaaaa
cagggggaaaaattaaaaaacaaagaaaagaatggcgttaacttggttattgaaaagaaa
cacaaaggtgatgagaaacacaaggtcaaagaagaacagcaaaagattaaaagtgatgga
agttttagtaggaagatggaaaaaggaaaaacaagcaaattgaatggggtaaaaagtgaa
aaacagtcaaaatctagatcaaacagttcatccgttagtgcaggaaaaatcaaatgtcat
ggaggtaagatcacaagtatccagaaatctgacaaaaaaaatgacaactcaaaatccaaa
acattaatgcataaaaatgggattcatgtaggtagtaaaaggaaagatgaggagatcaag
ggttcaaaatctgtgaaagataaggcaaaacgtttggaaaatagaaaagaaaattcatgc
tttgcaaagcgaacactcagtcacacagaattgtttggtgatgacagtagcgatgaagaa
agcacgagtaaacctgtcactgccatgacttataagtcagactccgactctgaccgagac
ccctgttccaattctagtgatgatgaaactggggggaatttagaacaaagatctttgtcg
tcagaggaggaagttgatttccccagtcttgaaaaggatttcgaatttgagtctgatcct
atggaggaatgcctgaggattttcaatgagtctaaagaagtaaagaatgaagataagggc
agagtttccaagcaggtgtctatggaaagtaatgaagataaagaatccagtctaaccaca
cttttcccaggacagaaaaggagaatttcacacgttgcaaagcaagaaaatgtggaacca
gccaagccagtcatccgtccttttcgtagatttactgctcaagaggtttgctaccaacga
ggtttgatggcacagcagcaagcagctcagctggtagaagtgaaaaaagcagttagcacg
tcttttaccaatcgagcggagaagaagagaattgcgcataagccaaaagcagatgggacg
ccatcagcaagacatgatgtggaaatgccggcattgccatcagcaagacaatctccagta
aagccgaagatggaatctataaatagaactgtagtatctcttaattgcccaagaaacagc
aacctcaatttaaaatctcaaactattgctggtatggcaccaaaaactgtaactactacg
gcacagaggaggatagcacatgctcccactttgaagtcaagcttgaagaggcccacgatt
cctaccgaatatggctccaaagttccaaccaatgtgaggcaacggtatctgaatgtgttc
attgatgaatgtttgaaattctgtggatctgaacaaatggcctttgaaaaggctttaagc
gaagaggagactgtatatcaacgaagtactagcaggactgtgtacctgaatgtcgctgta
aatactttgaagaagctgaggagtcaaaatgataccataccatcacctacaaagcagacc
gctgctgtagatgcaaacaagaaagtccagtcacatgaagcaatgttgggtggaaagttg
gccatgaagactagtttcactctaaatagatctggaaagcagcaagatgttgaacttgca
ggtgctatgctgtacaagaggctgaccgagtatgttttaactgaagagcaattgcaagaa
aattgctacccaaggcctcatccagagaaacccggtgttgcagtgctttataatcaggat
gagagaaagaatattactgaccctttattaaggatctgctgtcgctgcggatctgagtac
agtgtttccattcgtggggattgcatccgcaaggaagagtgcaactaccactggggacgg
ttacgccgacataaaatacccggtggttgggaaacacagtacagctgctgtggcggagca
gtaggatctgcagggtgtcagacagcaaagcaacatgtacaggatggccgtaaagtaaaa
ttagctggtttcatgaagacgtttgataaagaaataccaccagatgaaaacccaggtgtc
tttgccctggattgtgagatgtgctacacaaagcaaggtttggagctgacaagattgacc
gttatcaacccaaatctaaaagtggtgtatgatacatttgtcaaaccagacagtaaagtc
attgattataacaccagattttctggcgtaacagaggaggatatggagggtacaacaatt
actattcgtgatgtacaggcagtattactgaacatgttcagtgctgaaactatattaatt
gggcacagcttggaaagtgatttatttgcactaaagcttatgcatagcacagtgattgac
acagcaattgtgtttccacatcgactgggattgccatataaaagagcactgagaaacttg
atggcagactacctcaaacgcatcatccaggataatgttgaaggacatgattccagtgaa
gatgcttgtgcctgcatggagttaatgatgtggcgattaaaagaagatgcaaaactgaga
agatga
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